Rhizobium tropici: RTCIAT899_CH07535
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Entry
RTCIAT899_CH07535 CDS
T02432
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rtr
Rhizobium tropici
Pathway
rtr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RTCIAT899_CH07535 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtr03021
]
RTCIAT899_CH07535 (rpoA)
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH07535 (rpoA)
Enzymes [BR:
rtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RTCIAT899_CH07535 (rpoA)
Transcription machinery [BR:
rtr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RTCIAT899_CH07535 (rpoA)
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RTCIAT899_CH07535 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
McdB_C
IDH
Motif
Other DBs
NCBI-ProteinID:
AGB70906
LinkDB
All DBs
Position
1534131..1535141
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLSMSIETDGSISGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaaaaactggcaggaactgatcaagcccaacaaggtcgagttcacctcgagc
ggccgcaccaaggcaacgctcgtggccgaaccgctggagcgtggcttcggtctcaccctc
ggcaacgcgctgcgtcgcgttctgctgtcctctctgcgtggtgccgctgtgacggccgtg
cagatcgacggcgtattgcatgagttctcctctatcccgggcgtccgggaagacgtgacg
gacatcgtgctgaacatcaaggaaatcgccatcaagatggacggcgatgatgccaagcgc
atggtcgtccgcaagcagggcccaggcgtagtaacggctggcgacatccagacggtcggc
gatatcgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggtgccgaaatc
cgcatggaattcaccgtcaacaacggcaagggctatgtcccggccgagcgtaatcgtgcg
gaagatgctccgatcggccttatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgtgaaggacaggttctcgactacgacaagctgagcatg
tcgatcgaaaccgatggttcgatcagcggtgaagatgccgtcgctttcgcggctcgcatc
cttcaggatcagcttggcgtgttcgtcaacttcgacgagccgcagaaggaagccgaagaa
gaagcagtcaccgaactcgctttcaacccggcgctcctcaagaaggtggacgaactcgaa
ctgtccgttcgctcggcaaattgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacgccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcatctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgatacgaagaccagtactaa
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