Rhizobium tropici: RTCIAT899_CH07785
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Entry
RTCIAT899_CH07785 CDS
T02432
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH07785
Enzymes [BR:
rtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RTCIAT899_CH07785
DNA repair and recombination proteins [BR:
rtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RTCIAT899_CH07785
Prokaryotic type
RTCIAT899_CH07785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGB70955
LinkDB
All DBs
Position
complement(1584930..1586387)
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AA seq
485 aa
AA seq
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MTTSTKEPNPILLWFRKDLRLDDNHALQSAATSSRPLIPVYIREPGVTERGPLGGAQEWW
LHYSLAALQIALDAVGSKLILRHGEALTVLEKLVKETGAEAVVWNRRYDPAGVEVDTQIK
KALRSKGIEANSFAGQLLHEPTRLRTGTGNHYKTYTPFWRAFEQSGEPPFPIEAPRRLLA
PGRWPQSDSLDAWSLLPAKPNWASEFADIWTPGEAAALDKLKDFVDGALNDYAIGRDFPD
KPATSLLSPHLALGEISPARMWHATRGLPDKVGTDNVVRFRKEIIWREFCYHQLFHFPKL
RTANWNDRYDDFPWLSDAKRLKSWQRGQTGYPIVDAGMRQLWRHGWMHNRVRMIAASFLI
KDLLIDWREGEAWFRDTLVDADPAANTANWQWVAGSGADASPFFRIFNPVLQGEKFDPDG
GYVRTFVPELSKLDSKYIHRPFEAPDDVLKRAGIELGRHYPRPIVDHAMARQRALAAHAS
LKDDG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatcgacaaaagagccgaaccccatcctgctatggtttcgcaaggatctccgc
ctggacgacaaccacgcgctgcagtcggcggcaacatcgagtcgccctctaattcccgtc
tatattcgcgagccaggcgtcacggagcgtggcccgcttggcggagcacaggaatggtgg
ctgcattattcactcgctgccctccaaatcgctcttgatgcagttgggagcaagcttatc
ctccgccacggcgaagcgctgacggtgctcgaaaaactcgttaaggaaacgggggccgaa
gccgttgtctggaaccgtcgatacgatccggccggtgtcgaggtggacactcagatcaag
aaggcgttgcggagcaagggcatcgaagccaacagctttgccggtcagctgctgcacgaa
cccacgcgcctgcgcacgggaaccggtaaccattacaagacttacacgcccttctggcgc
gcgttcgagcaatccggcgagccgccgtttccgatcgaggcgccccgaaggcttcttgcc
cccggccgctggccgcaatcggactctcttgatgcttggtcgctgctgcccgccaagccg
aactgggcatccgagttcgcggacatttggacgccaggcgaagctgcggctctcgataag
ctgaaagacttcgtcgacggggcgcttaacgattatgcgatcggccgcgattttccggac
aaaccggcaacctccctgctctcgccacatctggcgctcggagagatttcacctgcccgt
atgtggcacgcaacacgcgggctgcctgacaaggtcggcacggacaatgtcgtccgcttc
cgcaaagaaatcatctggcgggagttttgctatcatcagctgttccatttcccaaagctt
cggacagccaattggaacgatcgttacgacgacttcccgtggctgtccgatgccaagcgt
ctgaaaagctggcagcgtgggcaaacaggctatccgatcgtcgatgccggcatgcggcag
ctgtggcgccatggctggatgcacaatcgcgttcgcatgatcgcggcatctttcctgatc
aaggatctgctgatcgactggcgcgaaggcgaagcgtggtttcgcgacacgctcgtcgat
gccgatccggccgccaataccgccaactggcagtgggtggccggctccggcgccgatgcc
tcaccgttcttccgcatcttcaatccggtgctgcaaggcgagaaattcgatccggatggc
ggctatgtcagaaccttcgtgccggagctctccaagctcgacagcaaatatatccaccgg
ccgttcgaggcgcccgatgacgtgctcaagcgtgcagggatagaactcggcaggcactac
ccccgccccatcgtcgatcatgccatggcgcggcagcgtgcactcgccgcgcacgcatcg
cttaaagatgatggatag
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