Rhizobium tropici: RTCIAT899_CH09945
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Entry
RTCIAT899_CH09945 CDS
T02432
Name
(GenBank) indigoidine synthase A family protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00240
Pyrimidine metabolism
rtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RTCIAT899_CH09945
Enzymes [BR:
rtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
RTCIAT899_CH09945
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TcdA_TcdB_pore
Motif
Other DBs
NCBI-ProteinID:
AGB71372
LinkDB
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Position
2001774..2002700
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AA seq
308 aa
AA seq
DB search
MTQPISPLLPISYSKEVAAAKLRGAPIVALESTIITHGMPYPGNIEMARSVEAIIRQEGA
VPATIAVIHGTLHIGLEPEELEALAKTEGALKVSRADIAFAIAERRTGATTVAATMIAAA
RAGIKVFATGGIGGVHRGAEESFDISADLEELSRTGVIVVCAGAKAILDIPKTLEVLETR
GVPVVTYDSTEFPAFWSRSSGLTSPLTLNSPAAIANFQTTREQLGIDGGMLIANPVPEAD
EIPREEMEIYIERALDSAERDEITGKAVTPYLLSTIFDITEGRSLKTNIALVENNARLAA
EIAVALAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcctatctcgcccctgcttccgatctcctattcgaaggaagtcgctgccgca
aagctccgcggtgcgccgatcgttgctctggaatcgacgatcatcacccacggcatgccc
tatccaggcaatatcgagatggcccgcagcgtcgaagcgatcatccggcaggaaggcgcg
gtacccgcgaccatcgccgtcatccacggtaccctgcatatcggcctcgagccggaagag
ctggaggcccttgccaagacagaaggtgcgttgaaggtctcgcgcgcagacatcgccttt
gcgatcgccgagcgccgcaccggcgcaaccaccgttgccgctacgatgatcgccgcagcc
cgcgccggcatcaaggtttttgccacaggcggcatcggcggcgtccatcgcggcgcggaa
gagagcttcgatatttcggccgaccttgaagagctgtcccgcaccggcgtcatcgtcgtc
tgcgctggagccaaggcgatcctcgatattccgaagacgctggaagtgctggaaacccgc
ggcgttccggtcgtcacctacgacagcaccgagttccctgccttctggtcgcgctcgtca
ggacttacgagcccgctgacgctgaacagcccggcggccatcgccaacttccagacgacg
cgcgagcagctcggcatcgatggcggtatgctgatcgccaatccggttccggaagcagat
gagatcccgcgcgaggagatggaaatctatattgagcgggccctcgacagcgccgagcgc
gacgagatcaccggcaaggcggttacgccttatctgctgagcacgatcttcgacatcacc
gaaggccgcagcctcaagaccaatatcgcgcttgtcgaaaacaatgcgcgcctggccgcg
gaaatcgccgtcgctctggcggactaa
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