Rhizobium tropici: RTCIAT899_CH10025
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Entry
RTCIAT899_CH10025 CDS
T02432
Name
(GenBank) hypothetical protein
Organism
rtr
Rhizobium tropici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
Baculo_PEP_C
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AGB71388
LinkDB
All DBs
Position
2018186..2024881
Genome browser
AA seq
2231 aa
AA seq
DB search
MANKKYIESVEDKAFQALDEALQIDFSDESLESRSGTTPDIPEQNVSEPPKQPIKQTRDD
AARKNGGARSTAAPATSPRPAEAPKNPNLAAANDGNRASSASILRALDGASQSRAVRNAT
IFSLLWIIGGAGLAFMLYGTQIRNIHSIADLAALPGVIACIVGIIVPVLLFYAFGTMISR
AHDMRNAARSMAEVALRLVEPETIASERIMTVGQAVRREVSAMNEGIERTIARATELETL
VHSEVNALERSYADNELRVRGLVHELGAERDAIVNHAERIRSSISGVHDQIKEDLSLATE
EIAVRLSTSGEAFASMIDTRAAALMEKSDSAVQALGTLLSAKTDSLLQNLNASGLALSHE
FDTRLESLSSTLADRGKDLLGQFETRASTLDANTEKLNSALNERARQLNETLVARTKEIS
ESLSGGERSITSTLDNVLSRLNTALDEKGASFRQSLQSTADDTIMDLDLRSGFFEERFQS
TIAQLSTTFDDRVSEFTSAFDKRAGSLDTKLSESLTRINQSLGSNSDALEGILTSSIERL
GSHLTDQSFALATTLATGQEVLESAIGSKANEITSALQNATTGISSALTSGTSELNTTLA
SHAGAFTSAVQGITRDVSAALQSGTEELTSAFTGRANDINNTLSARTNEITQALSSAHER
VDAVMAARSNALFGALADNQSRFEQTLAERSEAIASAVSGSHEHLTAALDERTSMLTISL
AESQLRLENTLASRTDAITGVLADTHSKLADTLDDKTMALAIALSESQSRLEDTVSGHAE
HVAGTLDAKTTELARALAEGQARLESTVSGHAESVTNALDDRTMALAIALSENQARLEET
VSGHADRVADTFEGKASALAAALTSGQTRLEETLANRAEAIIKAFAGNHNALAEALDDRA
MALAIALSEAQARLEDTVSGHADRVADTLDGKTRALSDALTSGQSRLEATLANRAEAITN
AFTSNHNALADALDDKAMALAISLSDTQSRLEDAVSSRLDALSDTVAGTHDKIVNSLDDR
TMALAIALSEGHAKLEDTLSHSAKAIAHTVTSGHEALTNTLDDKSMAFAISLAENQNRFE
SALEERANALLDSVSGAEARVAGAFGDKAEAIRAAYSENQERLDRSLTAHTDTLSEMLGA
NSDRVETVLGTTTRQLENTLGAGLSQMDQNLASAYERMRSTLEDRSNAINLALRDAHEQI
DNTLMEQTTAIGTSIATSASMLEMSLEDREASLRQTIDASARTLEERLNSGAGDIAGRIQ
QAAGDIARSAETFSSNLNQSIDGMTNRFAETGSRVEASLSALENRINEGVTGVSAQVDAA
GNRLSDTLASGAAKIDDSGSQAAARIEERLSTMDRALNLGLEAVNRTIEGKAANLATTLR
TAVADAAQGMDTEATRTAELLANTGRQFAENLGSHSDAFTRAMSERSDELVNRVSETQNR
LASQAAAVAQTFSEAGNAIVNKVAEAEGLVSNQVNTISQALSSAEQSLEARGAAIRNTLT
GGSEQIASTMAQVERALDERSTAIRSSLEERAREIDTTLADVDKALEARGSSIRTSLDER
TRELNSMLAGRSTELSRLIDEKARPIVDRYAATGQEAAALITAAAQESTERLRAENAALI
NAISSRTEHAVNTVSTLENNLLASVNGIIARLADNNSAIAGLLSNAASEFANVDDRLMAT
SSRFAESAAKAGEMVSASSRLLEGKVDKLSEITGQTLSQVGSIVGRFDDHSKVLTQASQL
LGAAQSNLVSTLEERETALQNLAVGLVQRSEEIENTMRALGSMVETAFDRAEQRSNQVTG
NLRQSVQSSFGDIGRVLSDAEKRAEDAAENMRTALQKAGEEANQAVENTFANAERRSGDL
TNRLRGGLTASLSEVEQMLADAGKTSDTAAQQLRETLRVAVDDAIGRFAGATDEIRRSAG
DIRRELDLTRNELKRGAFDLPEEAKESAAAMRRAVAEQIKALQDISQIVGRSTQQLEISE
PTARALAEAQPAPRPQPAASAPAAVAPRPQQPAPQQPAQQPPVAQQPVQRPAPQPQQPSI
ESLGLRGSLPAERPAAQPQRPAETAAPARQEAAGGGWISDLLRGASRDENAGLQPARQPA
AKAPPEQAPAPAARNPRHVVESLNSLSVDIARAIDHDASVDLWRRYQRGERDVFTRRLYT
LKGQQTFDEIKRKYDREPEFRTAVDRYIADFEKLLADVARTDRDRTVTQSYLTSDTGKVY
TMLAHAAGRLN
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaaaagtacatcgagtcggtcgaggacaaggcctttcaggcattggacgaa
gctttgcagatcgatttcagtgacgagagcttggagtctcgcagcggaactacgcccgat
atcccggagcaaaatgtgtctgagccgccgaaacagccgataaagcagaccagggatgat
gccgcccgcaagaacggcggagcgcgcagcaccgcagcccctgccacttcgccccgccct
gccgaggcgccgaagaatccgaacctcgctgccgccaatgacggcaacagggcaagttcc
gcaagcatattgagagcgctcgacggagcctcgcagagccgtgcggtgcgaaacgccacg
atcttctcgctgctctggatcatcggcggcgcaggcctcgcgttcatgctctatggcacc
cagatccggaacattcattccatcgcggatcttgccgcccttccgggcgtcatcgcctgc
atcgtcggcattatcgttccggtgctgctcttctatgctttcggcacgatgatctcgcgt
gcgcacgacatgcgcaatgcagcgcgctccatggcagaggtcgcgctacgtctcgtcgag
ccggaaaccatcgcttccgagcgcatcatgacggtcggtcaggccgttcgccgtgaagtc
tcggcgatgaacgaaggcatcgagcgcaccattgcacgcgcgacggaactcgaaaccctc
gtccattccgaggtcaatgcactggagcgcagctacgcagacaacgaattgcgcgtccgc
ggcttggtccacgaactcggcgcagaacgtgacgccatcgtcaatcacgccgagcgtatc
cgctcctcgatctcaggcgtgcacgatcagatcaaggaagacctgtcgctggcgaccgaa
gaaatcgccgtgcgcctctctacctctggcgaagctttcgcatcgatgatcgatacgcga
gcagccgccctgatggagaagtcggattccgcggtccaggccctcggcaccctgctttcc
gccaagaccgacagcctgctgcagaacctcaacgcctcgggcctcgcgctcagccatgaa
ttcgatacccgcctggaatctctgtcgtcgactcttgccgaccgcggcaaggacctgctt
ggccagttcgaaacgcgcgcctcgacgctcgatgcaaacaccgaaaaactgaattccgca
ttgaacgaacgtgcacgccagctcaatgaaacgctggttgcccgcacgaaggagatcagc
gaaagcctcagcggcggcgagcggtccatcacgagcacgctggacaatgttctgtcccgc
ctcaacacggcactcgacgaaaaaggcgcgagcttccgtcaaagcctgcagtcgacagcc
gatgacaccatcatggatctcgacctgcgctctggcttcttcgaagaacgcttccagtcg
acgatcgcgcagctttcgacgaccttcgatgaccgcgtgtcggagttcacctccgccttc
gacaagcgcgccggctccctggacaccaagctctcggaaagccttacccgcatcaatcag
tcgctcggcagcaattcggacgcgctggagggcatcctgacctccagcatcgagcgcctg
ggttcgcatcttaccgaccagtccttcgctctcgcaacgacgctggcaacgggccaggaa
gtattggaaagcgcgatcggctccaaggcgaacgagatcacctcggcgctgcagaacgcc
acgacaggcatttcttccgccctgacctcgggcacgagcgaactcaacaccacgctcgcc
tcgcatgccggtgccttcacatccgccgtgcagggtatcacgcgcgatgtctccgccgcg
ctgcaaagcggcacggaagaactcacctcggccttcaccggccgtgccaacgacatcaac
aacaccctctctgctcgcaccaacgagatcacgcaggctttgagctctgcccatgaacgg
gtcgatgccgtcatggcggcccgtagcaacgccttgttcggcgcgctggccgataaccag
tcccgtttcgagcagacgcttgccgagcgttcggaagcaattgccagcgccgtcagcggc
tctcacgaacatctgaccgccgccctggatgagcgtacctcgatgctgaccatttcgctg
gccgaaagccagctgcgcctcgaaaacacgcttgcgagccgtaccgacgcgatcactggc
gtcttggccgatacccacagcaagctggctgacacgctcgacgacaagacgatggcactt
gctatcgcgctttccgaaagccaatcccgcctggaagacacggtttccggccatgcggaa
cacgttgccggcacgctggacgccaagacgacggaacttgcgcgcgcgctggccgagggg
caggctcgtctcgaaagcacggtctcgggtcacgccgaaagcgtcaccaatgccctcgac
gacaggacgatggcgctcgccatcgcactttccgagaaccaggctcggctggaggaaacc
gtctccggtcacgcagaccgtgtcgctgacacgttcgaaggcaaggccagcgccctcgcc
gccgcgctgacctccggacagactcgtcttgaagaaactctcgcgaaccgcgccgaggcc
atcatcaaggcatttgcaggcaatcataatgccttggccgaagcactggacgacagagct
atggcgctcgccatcgcattgtcggaagcccaggcccgcctcgaagataccgtctccggc
catgccgatcgcgttgccgacacgctcgacggcaagacacgggcgctttccgatgcgctg
acctccggccagtcacgtctcgaagcgacgcttgccaatcgcgccgaggcgatcacgaat
gcattcaccagcaaccacaatgcgctggccgatgcactggacgacaaggcgatggctctc
gccatttcgctctcagacacccagtcacgcctcgaggatgcggtatccagccgtctcgac
gccctctccgatactgtcgccggcacccacgacaagatcgtcaacagcctggacgacagg
acgatggcgcttgccatcgccctttcggagggccatgcgaagctggaagacactctttcc
cacagcgccaaggccattgcccataccgtcaccagcggtcacgaggcgctgaccaacacg
ctcgacgacaagagcatggccttcgcaatctcgcttgcagaaaaccagaaccgcttcgaa
agcgccctggaggaacgcgccaacgcacttctcgacagcgtctccggtgcagaggcccgc
gttgccggagcctttggcgacaaggcggaagccatccgtgctgcctatagcgaaaaccag
gaacgcctcgaccgctcgctcaccgcccatacggacactctctccgaaatgctcggcgcc
aacagcgatcgcgtcgagaccgttctcggaacgacgacccgccagctggagaacacgctc
ggtgccggtctgtcgcagatggatcagaacctcgcctcggcctatgagcgtatgcgttcc
acgctggaagaccgcagcaatgcgatcaaccttgccctgcgcgacgcgcatgagcagatc
gacaacacgctgatggaacagacgaccgccatcggcacctcgattgccaccagcgccagc
atgctggaaatgtcactcgaggaccgtgaggcttcgctgcgccagaccatcgacgccagc
gcgaggacactggaagagcgcctgaacagcggtgcgggcgacattgccggccgtatccag
caggccgccggcgacatcgcacgctcggccgaaaccttctcgtccaacctcaaccagtcg
atcgacggcatgacgaaccgctttgccgagaccggctcgcgggtcgaagctagcctgtcg
gcgctcgaaaatcgcatcaacgaaggcgtcaccggcgtttccgcccaggtcgatgccgcc
ggcaaccgcctctccgatacactggcgagtggcgcggcaaagatcgacgacagcggcagc
caggcagctgctcgcatcgaagagcgcctttcgaccatggatcgcgcgctcaatctcggc
ctcgaagcggtcaaccgcacgatcgaaggcaaggctgccaatcttgcaacgacgctgcgc
acggccgttgccgacgccgcgcagggcatggacacggaagcaacccgcacggccgaattg
ctcgccaataccggccggcaattcgccgagaacctcggcagccatagcgatgcctttacg
cgtgccatgagcgagcgctccgacgagctcgtcaaccgcgtctcggaaacgcagaaccgg
ctggcaagccaggctgcggccgtcgcccagaccttctcggaagcaggcaacgcgatcgtc
aacaaggttgccgaagccgaaggcctcgtcagcaaccaggtcaatacgatctcgcaggcg
ctctcttcggccgaacagtcgctggaggcccgcggcgcggccatccgcaacacgcttacc
ggcggcagcgagcaaatcgcctccaccatggcgcaagtcgagcgtgcgctcgacgagcgc
agcacggcgatccgcagctctctggaggaacgcgcccgcgaaatcgacaccacgcttgcc
gatgtcgacaaggccctggaagcccgtggctcctccatccgcacctcgctcgacgaacgc
acgcgcgagctgaattcgatgctggctgggcgctctaccgaactctcgcgcctcatcgac
gaaaaggctcgcccgatcgtcgatcgctacgcggcaacgggtcaggaggcggccgctctt
atcacggcggcagctcaggaaagcacggaacgcctgcgcgctgaaaatgccgcgctcatc
aatgcgatctcgtctcgcactgagcacgcggtcaacacggtcagcacactcgaaaacaac
ctgcttgcgagcgtcaatggcatcatcgcccgcctggcggacaacaactcggcgatcgcc
ggactgctgtccaatgccgcaagcgaattcgcaaacgtcgatgaccgtctcatggcaacc
tcgtcacgcttcgctgaatccgccgcgaaggccggcgagatggtctcggcctccagccgt
cttctcgaaggcaaggtcgacaagctgtctgagatcaccggccagaccttgtcgcaggtc
ggcagcatcgtcggtcgtttcgacgatcactccaaggtgctgacgcaagcatcccagctt
ctgggcgccgcccagtcgaacctcgtatcgacgctggaagagcgcgagacggcactgcag
aacctggccgtcggcctcgttcagcgctcagaagagatcgagaacaccatgcgcgccctc
ggctcgatggtagaaacggccttcgatcgggcggaacagcggtcgaaccaggtgaccggc
aatctccgccagagcgtgcaatcttccttcggcgatattggccgtgttctctccgacgcc
gagaagcgcgccgaagatgcggcggaaaacatgcgcaccgcattgcagaaggccggcgaa
gaagccaaccaggctgtcgagaacacattcgccaacgccgagcgccgctccggcgatctc
accaatcgcctgcgcggtggcctcacggcctcgctgtccgaggttgagcagatgctcgcc
gacgccggcaagacctcggatacggctgcccaacagctgcgggagaccctgcgcgtcgcg
gtcgatgacgcgatcggccgcttcgccggtgcgacggacgaaatccgccgctcggccggc
gatatccgccgcgagcttgacctcacccgcaacgaactgaagcgcggtgccttcgatctt
ccggaagaagcaaaggagagcgctgcagctatgcgtcgcgccgttgccgaacagatcaag
gccctgcaggacatctcgcagatcgtcggccgctcgacgcagcaactggagatttccgag
ccgaccgctcgcgcgctggccgaagcacagcctgctccacggcctcagcccgccgcatct
gccccggcagctgtagccccgcggcctcaacaacctgctccgcagcaaccggcgcaacag
cccccggtcgcccagcagcccgtacagcgccctgcaccgcagccgcagcagccttcgatc
gagtcccttggcttgcgtggatcactccctgccgagcgaccggcagcacagccgcaacgt
ccggcggaaacagcagcccctgctcgccaggaagcggccggtggcggctggatcagcgat
ctgctgcgaggcgcgtcgcgcgatgagaatgccggtctgcagccggcccgccaaccggcg
gcgaaagcgcctccggaacaggctcctgctcccgctgcacgcaacccgcgccatgtcgtg
gaatcgctgaactcgctttcggtcgatatcgctcgcgccatcgatcatgacgcctcggtc
gatctctggcgccgttaccagcgcggcgaacgcgacgtgttcacccgccggctctatacg
ctcaagggtcagcagaccttcgacgagatcaagcgcaagtacgaccgtgagccggaattc
cgcaccgcagtcgatcgctacatcgccgatttcgaaaaactgctcgccgatgtcgcgcgt
accgatcgcgatcgcaccgtcacgcaatcctatctcacgtccgataccggcaaggtctac
acgatgctggcccacgcagccggccgcctgaactga
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integrated database retrieval system
