Rhizobium tropici: RTCIAT899_CH10195
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Entry
RTCIAT899_CH10195 CDS
T02432
Name
(GenBank) putative peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtr01002
]
RTCIAT899_CH10195
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
RTCIAT899_CH10195
Peptidases and inhibitors [BR:
rtr01002
]
Cysteine peptidases
Family C82
RTCIAT899_CH10195
Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RTCIAT899_CH10195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGB71422
LinkDB
All DBs
Position
complement(2063526..2065340)
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AA seq
604 aa
AA seq
DB search
MTLMDFIRGGQGRQQSTQVSAPVPVNPVQTLDPDQPPRAKQPLPTVDAPKYYTYKADQMR
LVSTAHFADPVVTGAVADASPSPVAVDAGISQRRYLADARVMATNDIAKAIEAYYADQSK
PLLWVADHAVSDKAKAAMAALADAGSVGLDPADYAVTLPSADAENADPVMRDRALMQFEL
ALSSKILMFVQDTVRGRLDPNKISGYHDFKRKDVNLTAMLDVLRASPDVPAYLNSRNPSN
QQFQALKAELAKLRAESGSDGSHISISLTGILKPGGSSPEMVNIVKAIQHRGSDALKAAH
ADLFDAYLGTPDYTPELVSLVEDFQREKGLTADGVIGSSSVRAMVGENNDVKIQKLVIAM
EQLRWLPPELGPRYVFINQPAFMVYYYNNNQEQLSMRVVVGSKQHQTFFFENQVQTVEFN
PFWGVPQSIIINEMLPKLRSDPNYLDRMGYQVEVGGRAVASSSVDWYGSTKSISVRQPPS
SDNALGELKILFPNSHAIYMHDTPQKSFFKKDMRALSHGCVRLADPRAMAAAVLNTTVDD
IAKQIATGQNKAVAVPQKFPIYIAYFTAWPNKDGVIQYFNDVYDRDAATQKALDATSKAR
TAQI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatggatttcatccgtggcggccagggccgtcagcagagcacgcaggtttcg
gctcccgttcctgtcaatccggtgcagacgctggatcctgatcagcctccgcgggcgaaa
cagccgctcccgaccgtcgatgcgccgaaatattatacctataaggccgaccagatgcgc
ctggtgtcgacggcgcatttcgccgacccggtcgtgaccggtgccgttgcagatgcttct
ccctcgccggtcgcggtcgatgccgggatttcgcagcgccgctatctggcagatgcgcgc
gtcatggcgaccaatgacatcgccaaggcgatcgaagcctattacgccgatcagagcaag
ccgcttctctgggttgccgatcatgccgtcagcgacaaggcgaaggctgctatggcggct
cttgccgatgcgggttccgtcggcctcgatcccgccgattatgcagtaactttgcctagt
gccgatgcggaaaacgccgatccggtcatgcgcgatcgcgcgctcatgcaattcgagctc
gcgctgtcgagcaagatattgatgttcgtccaggatacggttcgcggtcgtctcgatccg
aacaagatttccggctatcacgacttcaagcgcaaggatgtcaatctgacggcgatgctt
gatgtattgcgcgccagcccggatgttccggcttatctcaacagccgcaacccgtccaat
cagcaattccaagccttaaaggcggaactcgccaagctgcgtgcggaatccgggtcggac
ggcagccatatcagcatttcgctgaccggaattctgaagccaggtggcagctcgccggaa
atggtcaacatcgtcaaggcgatccagcatcgcggatcggatgcgctgaaggctgcccat
gccgatcttttcgatgcctatctgggtacgccggactatacgcccgaactcgtgtcgctg
gttgaagacttccagcgcgagaagggtctgacggctgacggcgtgatcggctcgtcctcc
gttcgcgccatggtcggcgagaacaatgacgtgaagatccagaagctggtcatcgccatg
gagcagctgcgctggctgccgcctgagcttggcccgcgctatgtcttcatcaaccagccg
gctttcatggtctattactacaataacaaccaggagcagctgtcgatgcgcgtcgtcgtc
ggcagcaagcagcaccagaccttcttcttcgaaaatcaggtgcagacggtcgaattcaat
ccgttctggggcgttccgcagtcgatcatcatcaacgagatgctgccgaagctgcgttcc
gatccgaactatctcgaccggatgggctatcaggtcgaagtcggcggccgcgccgtcgca
tcgtccagcgtcgactggtacggctcgacgaagagcatctcggttcgccagccgccgagc
agcgacaacgcactcggtgaattgaagatcctcttcccgaactcgcatgcgatctacatg
cacgacacgccgcagaagagcttcttcaagaaggatatgcgcgcactcagccacggctgc
gtccgccttgccgatccgcgcgcgatggccgccgccgtgctgaacacgacggtcgacgat
atcgccaagcagatcgccaccggccagaacaaggcagtggccgtgccgcagaaattcccg
atctacatcgcctatttcaccgcgtggccgaacaaggacggcgttatccagtacttcaac
gacgtctacgatcgtgacgccgccacgcagaaggcgctcgatgcgacctcaaaggcacgc
actgcccagatctaa
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