Rhizobium tropici: RTCIAT899_CH10615
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Entry
RTCIAT899_CH10615 CDS
T02432
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00860
Porphyrin metabolism
rtr01100
Metabolic pathways
rtr01240
Biosynthesis of cofactors
Module
rtr_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RTCIAT899_CH10615 (cobN)
Enzymes [BR:
rtr01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
RTCIAT899_CH10615 (cobN)
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
AGB71505
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Position
complement(2144342..2148490)
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AA seq
1382 aa
AA seq
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MHLLLAQKGTISDGEEAIDLGQTPGDILFLSAADTELAAIAAAHGEGDCFLRLASLMSLK
HPMSVDTYIDRTARYAKLIIVRALGGASYFHYALEALYACAARQGALIAVLPGDSKPDPG
LTPFSNVALDDLNALWSYLIEGGEANSRAFLAYAAAMLSGAEKPMPAVPLMKAGIWWPGR
GVIGVEEWKRLEIEWRVRPSPQPSPRIDGEREHIESAVPPSPRVRGEGARRADEGRSSPL
DAAIDLEQVQEIEPPTVAISFYRALVQSGETKPVEAMIEALIAEGMRPLPVFAYSLKDAV
SVGILESVFTELQPGVVINATGFAVSAPGADRQATVLETGDAVVLQAIFSASSKEAWEAS
SQGLSARDLGMNVALPEVDGRVLARAVSFKAAARYDERVEANIVASEPLEDRMRYTARLA
ASWARLRNTPPGDRRVALVMANYPNRDGRLGNGVGLDTPAGTIEVLKAMQAAGYSVADLP
ADDDALMRHLAEGPTNSGHDGRVVRERLSFSDYKDFFSSLPQKIQDEITLRWGRPEADPY
ALDNGFALPFARFGDVLVGIQPARGYNIDPKESYHSPDLVPPHGYLAFYAFLRRSVDAHA
VIHMGKHGNLEWLPGKALALSESCYPEAILGPLPNLYPFIVNDPGEGTQAKRRTSAVIID
HLTPPLTRAESYGPLKDLEALVDEYYEASGGDPRRIRLLRKQILDLVADIGLDQDAGIAK
GEGEDEALRKLDAYLCDLKEMQIRDGLHIFGVSPSGRLLTDLTVALARVPRGLGEGGDQS
LQRAIARDIFEGVESLAGVESVVSPSVADATSPPQGGRLVARGTTSPQMAIEVADTVDGE
AGKPGGILPPISPLVGEMSAKLTEGGISPGKPFDPLDCDMAAEWTGPRPAILNDISDVPW
RTQGDTVERIELLAAKLVDGETACPENWPNTRMVLEEIAAKLQPSILACGDAEIFALLKG
LDGRFVPPGPSGAPTRGRPDVLPTGRNFYSVDSRAVPTPAAYELGKKSAELLIRRYVQDH
GEWPVSFGLTAWGTSNMRTGGDDIAQALALIGVKPVWDMTSRRVTGYEIITTAMLRRPRV
DVTLRISGFFRDAFPEQIALFDKAIRAVGMLDEDAADNPIAARMRGEIARLEAVGLDAAS
ASRRAGYRVFGSKPGAYGAGLQALIDEKGWERRADLAEAYLVWGSYAYGAGEEGRAERGV
FEERLRSIQAVVQNQDNREHDLLDSDDYYQFEGGMAAAAEQLAGARPSIYHNDHSRPEKP
VIRSLEEEIGRVVRGRVVNPKWIDGVMRHGYKGAFEIAATVDYLFAFAATTGVVRNHHFE
AVYQAFIVDQRVRDFMAEKNPAALRDLKERLLEAIDRNLWTPKSNSAHFDLESLKSGKEV
AA
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcctcctagcacaaaagggaacgatcagcgacggcgaggaggcgatcgacctt
gggcagacgcccggcgatatcctctttctgtcggctgccgataccgagcttgcggcgatt
gccgcagcgcatggcgagggcgactgtttccttcggctcgcgagcctgatgagcctcaag
catccgatgtccgtcgatacctatatcgacaggaccgcgcgatatgcgaagctcatcatc
gtgcgagccttgggaggagcaagctatttccattatgcgctggaggcgctgtatgcctgt
gcggcgcgccagggtgccttgatcgcggtgctgccgggggattcgaagcccgatccgggg
ctgacgcccttttccaacgtcgcgctcgatgatctcaacgcgctctggtcctatctgatc
gagggcggcgaggcgaattcgcgggcgtttctagcctatgccgcggcgatgctctcgggt
gccgagaagccgatgccagccgtgcccttgatgaaggccggaatctggtggccgggcagg
ggcgtaatcggcgtggaggagtggaagaggctcgaaatcgaatggagggttcgcccctca
ccccagccctctccccgtattgacggggagagggagcatatcgagtccgcagttccccct
tcgccccgcgtgcggggagaaggtgcccgtagggcggatgaggggcgaagctctcccttg
gatgccgccatcgatttggagcaggtgcaggaaatcgaacccccgaccgtcgcgatttcc
ttctatcgcgcgctggttcagagcggcgaaactaaaccagtcgaagcgatgatagaggcc
ctcatcgccgagggcatgcggccgttgccggtctttgcctatagtctcaaggatgccgtg
tccgtcggcattctcgaaagcgtctttactgagctgcagccgggcgtggttatcaacgcg
acaggctttgccgtttcagcaccgggcgcggatcggcaggcaacggttctggagacgggc
gacgctgtcgttctgcaagccatcttctctgcttcatcgaaggaggcgtgggaggcatcc
tcgcaggggctttcagcgcgcgatctcggcatgaacgtggcgctgccggaagtcgacggc
cgtgttcttgcccgcgcggtgtccttcaaggcggctgcccgctatgacgagcgggtggag
gccaatatcgtcgccagcgaaccgctcgaggatcgcatgcgctatacggctcggctcgcc
gccagttgggcgcggctgcgcaatacgccgcccggtgatcgccgtgtcgcgctcgtcatg
gcgaactatcccaatcgcgatggacgtttgggcaacggcgtcgggctcgatacgccggcc
ggcacgatcgaggtgctgaaggcgatgcaggcggcgggctatagtgttgccgatctgcct
gccgatgacgatgcactgatgcggcatctggcggaaggcccgacaaattccgggcatgat
ggccgcgtcgttcgcgagaggctttcctttagcgactacaaggatttcttctcgtcgctt
ccccaaaagattcaggatgaaatcacgctgcgttgggggaggcctgaggcagatccttac
gcgctcgataacggctttgccctgccgttcgcccgcttcggcgacgtgcttgtcggcatc
cagccggcgcgcggctacaatatcgatccgaaggagagctaccactctcccgatctcgtt
ccgccccacggctatcttgccttctatgccttcctgcgccgttccgtcgatgcgcatgcg
gtcatccacatgggcaagcacggtaatctcgaatggctgccgggcaaggcgctggcactg
tcggaaagctgctatccggaagcgatcctcggaccgttgccaaacctctatcctttcatc
gtcaacgatcccggcgagggcacgcaggccaagcgccgcacgagcgccgtcatcatcgac
cacctgacgccgccgctgacgcgcgccgaaagctatggcccgctgaaggatctggaggcg
ttggtcgacgaatattacgaggcttcgggcggcgatcctcgccgcatccgtctgcttcgc
aagcagatcctcgatctcgttgccgatatcggcctcgatcaggatgccggcatcgccaag
ggcgagggcgaagacgaggccttgcgcaagctcgacgcctatctctgcgatctcaaggaa
atgcagatccgcgatggcctgcatattttcggcgtttcgccttccgggcggttgctgacg
gatttgacggtggcgctggcaagagtgccgcgcgggctgggcgagggcggtgatcagagc
ctgcagcgggcgattgctcgggatatttttgagggtgtggagagtttggcgggtgtggag
agcgtggtatccccctctgtcgctgacgcgacatctcccccacagggggggagattggtg
gctcgcggcacgacatcgcctcaaatggccatcgaggtcgctgatactgtcgatggagag
gcaggaaagccaggcggcatactcccgccaatctccccccttgtgggggagatgtcagcg
aagctgacagaggggggtatctctccaggcaaacctttcgaccctttggactgcgacatg
gccgccgaatggaccggcccgcgccccgccatcctcaacgacatctccgatgtcccttgg
cgcacccagggcgataccgtcgagcgcatcgaactcttggctgcgaaactcgtggatggc
gaaacggcttgccccgagaattggccaaacacccgtatggtccttgaagaaattgccgca
aagctccagccgtccatcctggcctgcggcgatgcagaaatcttcgccctgctcaaaggc
ctcgacggccgcttcgttccgcccggcccctccggtgcgccaacgcggggccggccggat
gttctgccgacggggcggaatttctattctgtcgacagccgtgcggttccgacgccggcc
gcttacgaacttggcaagaaatcggccgagttgctgatccgccgctacgtgcaggaccat
ggcgaatggcccgtttccttcggcctgaccgcctggggcacttcgaacatgcgcacgggc
ggtgacgatatcgcgcaggcgctggcgctgatcggcgtcaagcccgtctgggacatgacg
tctcgccgcgtcaccggctacgagatcatcacgactgccatgctccggcggccacgtgtc
gacgtgacgctgcgcatttccggctttttccgtgacgcgtttcccgaacagatcgccttg
ttcgacaaggccatccgtgccgtcggcatgctcgatgaggatgcggcggacaatcccatt
gcggcgcgcatgcgcggcgagatcgcgcggctcgaagctgtcggcctcgacgctgcctct
gccagccgcagggcgggttatcgggtcttcggttccaaacctggggcttatggcgccggt
ctgcaggcactcatcgatgagaagggatgggagcggcgtgccgatctggccgaagcctat
ctcgtctggggcagctatgcctatggcgcgggcgaggaaggaagggcggagcgcggtgtc
tttgaggagcggttgcgctcgatccaggctgttgtccagaaccaggacaatcgcgagcac
gacctactcgacagcgatgactattatcaattcgagggcggtatggctgctgctgccgag
cagctcgccggcgcccgcccgtcgatctatcacaatgaccattcgcggccggaaaagccg
gtcatccgttcgctggaagaagagatcggccgggtggtgcgcgggcgtgtcgtcaatcca
aaatggatcgatggcgtcatgcggcatggctacaagggcgcgttcgagattgcggcgacc
gtcgattatctctttgctttcgccgcgacgactggagtcgtccgcaatcatcatttcgag
gccgtatatcaggccttcatcgtcgatcagcgcgtgcgcgatttcatggcggagaagaac
ccggcggcactgcgggacctgaaggaacggctgctggaggcgatagatcgcaatctctgg
acgccgaaaagcaactcggcgcatttcgatctggagagcctgaaatcgggcaaggaggtt
gcggcttga
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