Rhizobium tropici: RTCIAT899_CH11150
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Entry
RTCIAT899_CH11150 CDS
T02432
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rtr
Rhizobium tropici
Pathway
rtr03420
Nucleotide excision repair
rtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RTCIAT899_CH11150
03430 Mismatch repair
RTCIAT899_CH11150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_CH11150
Enzymes [BR:
rtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RTCIAT899_CH11150
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RTCIAT899_CH11150
MMR (mismatch excision repair)
Other MMR factors
RTCIAT899_CH11150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGB71611
LinkDB
All DBs
Position
2253277..2255751
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AA seq
824 aa
AA seq
DB search
MGRMTIGHDDIPFFDEEPEHTAPRRSAPAAGSIGGGIAARAMAARDSGRRPDYLSGLNAE
QTEAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTNRAFPSQILAVTFTNKAAREMKER
IALLVGGAVEGMPWLGTFHSIGVKLLRRHAELVSLTSSFTILDTDDVIRLIKQLIQAEGL
DDKRWPAKQFAGMIDTWKNKGLSPADIPEGDARAFANGKGRELYAAYQNRLKTLNACDFG
DLLLHPINIFRQNPDILKDYHQRFRYILVDEYQDTNTAQYMWLRLLAQRQKGEPQNVCCV
GDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLGK
TLFTDRSDPDDIKVQVHASWDSEEEARAIGEEIEQLQRNKHNLNDIAILVRASFQMREFE
DRFVTLGLNYRVVGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIINTPKRGLGDTTVR
ALHDYARVRDIPMLAAAADIIETDEMKPKARKALFDVVQSFRRWQGLLENTPHTELAEQI
LEESGYTDMWKNDKSAEAPGRLENLKELIRSMDSFESMRGFLEHVALVMDAEQNENLDAV
SIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKRRCHI
WFVSNRRIHGLWQSTIPSRFLDELPEMHVQVAEVEQSYGGYGRGGYGQSRFDKADPFANS
YSTPGWKRAQANRNDATRDNWGSRSGHAVERIGYGESGPKVRTIDGELVAKSTSSEPSKF
AIGDRVFHIKFGNGNVSEIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
ttgggccgcatgaccattggacatgacgacattcccttctttgacgaggagccggagcac
accgcgccgcgccgttcagcgccggctgccggcagcattggcggcggcatcgcggcccgc
gccatggcggcacgcgatagcggccgccggccagattacctctcgggccttaatgccgag
cagacggaagccgtggaaacgctcgacggccccgttctggtgcttgcgggcgccggcacc
ggcaagacgcgcgtgctgacgacgcgcatcgctcatattctctccaccaaccgcgccttc
cccagccagatcctcgcggtcactttcaccaacaaggcggcccgtgagatgaaggaacgc
atcgcgctgctcgtcggcggcgcggtcgaaggcatgccttggctcggcaccttccactcg
atcggtgtcaagctgttgcgccgtcatgccgagctggtgagcctcacctccagcttcacg
attctcgataccgacgacgtcatccgcctgatcaagcagctgatccaggccgaagggctc
gacgacaagcgctggccggccaagcagtttgccggcatgatcgatacctggaagaacaag
ggcctgagccccgccgatattccggaaggcgacgcgcgcgcctttgccaacggcaagggc
cgcgaactctatgccgcctaccagaaccgcctgaagacgctgaacgcctgcgacttcggc
gatctcctgctgcatccgatcaatatattcaggcagaatcccgatatcctcaaggattat
caccagcgctttcgctatatcctggttgacgagtatcaggacaccaacacggcacagtac
atgtggcttcgcctgctggcgcagcggcagaagggcgagccgcagaatgtctgttgcgtc
ggcgacgacgaccagtcgatctatggctggcgcggcgcggaggtcgacaatatcctgcgc
ttcgagaaggattttccgggcgccaaggtcatcaagctggaacgcaactaccgctccacc
gaacacattctcggtgccgccgcgcatctgatcgcccataatgagggccggctcggcaag
acgctgttcaccgatcgctccgaccccgatgacatcaaggtgcaggtgcatgcctcctgg
gattccgaggaggaagcacgcgcgatcggcgaagagatcgagcaactgcagcgcaacaag
cacaatctcaacgacatcgccatcctcgtgcgcgcctccttccagatgcgcgagttcgaa
gaccgcttcgtcacgctcggtttgaactatcgcgtcgtcggcggccctcgcttctacgag
cgcctcgaaatccgcgatgccatggcctatttccgcctcgtctgccaaccggccgacgat
ctcgccttcgagcgcatcatcaacacgccgaagcgcggcctcggcgacaccacggttcgc
gccctgcacgactacgcccgtgtgcgcgatatcccgatgctggcggcggcagccgatatc
atcgagacggacgagatgaagccgaaggcgcgcaaggcgctgttcgacgtcgtgcagtct
ttccgccgctggcagggtctgctcgaaaacacgccgcataccgagcttgccgagcagatc
ctcgaagagtccggctatacggacatgtggaagaacgacaaatcggcggaagcgccgggg
cgcctggaaaacctgaaagaactgatccgctccatggacagcttcgagtccatgcgtgga
ttcctcgagcacgtcgccctcgtcatggatgccgagcagaacgaaaatctcgatgccgtc
tccatcatgacgctgcactccgccaagggtctggaattcgataccgtgttcctgcccggc
tgggaagaaggcctgtttccgcatcagcgctcgctcgacgaaagcggtcgcgccggcctc
gaggaagagcgccgcctcgcctatgtcggcatcacccgcgccaagcgccgctgccacatc
tggttcgtttccaaccgccgcatccacggcctctggcaatcgactatcccctcccgcttc
ctcgacgaactgccggaaatgcatgttcaggtcgccgaagtcgagcaatcctatggcgga
tatggccgcggcggctacggccagtcccgcttcgacaaggcagatcctttcgccaattcc
tattccacgcccggctggaaacgcgcccaagccaaccgcaatgatgcgacgcgcgacaac
tggggcagccgctccggccacgccgtcgaacgcatcggctacggcgaaagcggccccaag
gtgcgcaccatcgacggcgagctggtggccaaatccacctcctccgaaccctccaaattc
gccatcggcgaccgcgtcttccacatcaaattcggcaacggcaacgtctcggaaatcgag
ggcaacaagctgacgatcgaattcgaccgcgccgggcagaaaagggtgttggatggattt
gtggagagggtgtga
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