KEGG   Rhizobium tropici: RTCIAT899_CH11985
Entry
RTCIAT899_CH11985 CDS       T02432                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rtr  Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtr03032]
    RTCIAT899_CH11985
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_CH11985
Enzymes [BR:rtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RTCIAT899_CH11985
DNA replication proteins [BR:rtr03032]
 Prokaryotic type
  DNA Topoisomerases
   RTCIAT899_CH11985
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RTCIAT899_CH11985
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact GTP-bdg_M MBD
Other DBs
NCBI-ProteinID: AGB71778
LinkDB
Position
complement(2416870..2417955)
AA seq 361 aa
MNQMLPKVGVAAATAEAKLTSGLIYIPSLNVGITRKQGKNGFLYYSPTGKRITEPSEINR
LNALAIPPAYTNVVISSNPLSHLQAIGTDARGRKQYRYHPDWQSERERAKFDRLVDFAAR
LPDIRQRVDRDLRSRGLTMERALATVVWMLDNLYIRVGNVAYAEMNRSYGLTTLRRRHVQ
VEGGSVKFRFTGKSGKEWNLVHYDRRIANIVRRLQELPGQQLFKYVCDDSGCRQISSEDV
NAYIQETAGGDFSSRQFRTWGATCMAVSALASLKVEKTERAIARQINSVVDPIASRLVNT
RSVCKSSYIHPAVFEDFRAGVLADVLKIRTSSSRLLEWMELEEIRVQHWLRRRAQKRQSS
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaccagatgctccccaaagtcggcgttgcagcggctaccgcagaggccaagcttacc
tccggattgatctacattcccagcctcaatgttggaattacccgaaagcagggaaagaac
ggtttcctctactactcgcccacgggaaagcggatcacggaaccttcggagatcaatcgc
ctgaatgcattggcaattcctccagcctatacgaacgtggtgatctcctccaatcctctt
tcacaccttcaggccattggaacggacgcgcgcggccgcaaacaataccgctatcatccc
gattggcagtcagaacgggagcgcgcgaagttcgatcgcctcgtcgatttcgcggcccgc
ctgccggacattcgccaacgggtagatcgggatctgcgctcgcgaggtctgaccatggaa
agggcattggcgacagtcgtctggatgctggacaatctctacattcgcgtgggtaacgta
gcctatgcggaaatgaaccgatcctacggcttgaccacgctcaggaggcggcacgtgcaa
gtggagggtggaagcgtcaagtttcgtttcactggaaaatccggcaaggaatggaacctc
gttcactatgaccgccgcatcgccaacatcgtgcgccgcctgcaggaactgccgggacag
caactgttcaaatatgtctgcgatgatagcggatgccgtcagatctcatcggaggatgta
aatgcttacatccaggaaacggccggaggcgatttcagctcgcgtcagttcaggacttgg
ggcgcgacctgcatggcagtgtccgcgctggcttcgcttaaggtcgagaaaaccgagcgg
gctatcgcccgccaaatcaacagcgtggtcgacccaatagcatcacggctcgtgaacacc
cgctcagtttgcaagtcctcttacatccacccggcggttttcgaggatttccgggcagga
gtgcttgccgatgttctcaagatccggacgagtagcagccggcttctggaatggatggaa
ttggaggaaatccgcgttcagcactggctcaggaggcgtgctcagaagcggcaatcttct
gattga

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