Rhizobium tropici: RTCIAT899_CH13020
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Entry
RTCIAT899_CH13020 CDS
T02432
Symbol
choW
Name
(GenBank) choline ABC transporter, permease protein ChoW
KO
K02001
glycine betaine/proline transport system permease protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RTCIAT899_CH13020 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_CH13020 (choW)
Transporters [BR:
rtr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RTCIAT899_CH13020 (choW)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
PsbK
Motif
Other DBs
NCBI-ProteinID:
AGB71983
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Position
2616760..2617617
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AA seq
285 aa
AA seq
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MGKDVNWLTDYRIPIGPWAKAIVDWLTSNVTWFFDGLSFVVAHGIKWLLFLLQAPHPLIV
VVAFTAIAYWMRRSVTITVLTLIGLLITINQGYWKETTETLALVLASTFVCMLVGVPLGI
AAARRPWLYSIMRPILDLMQTIPTFVYLVPAMILLGLGMVPGLVATVVFALPAPIRMTRL
GIISTPPSLVEAAESFGATPRQVLRKVELPFATPQIMAGLTQTIMLSLSMVSIAALVGAP
GLGVPVLRALNSVNVAKSFDSGACIVILAIILDRMFRAPGEGDHS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaagatgtgaactggttaaccgattaccgcatccctatcgggccatgggccaaa
gccatcgtcgattggctgacgagcaatgtcacatggttcttcgacggcctttccttcgtg
gtcgcgcacggaatcaaatggctgctgttcctcttgcaggcaccgcatccgctgatcgtc
gtcgtcgccttcacggcaattgcctattggatgcgccggagcgtcaccatcacggtcctc
accctgatcggcctgctgatcaccatcaaccagggctattggaaagagacgaccgagacg
ctggcactggtattggcctccaccttcgtatgcatgctggtgggcgtgccgctcggcatc
gcggcagcacgccgtccctggctttactccatcatgcggccgatactcgatctgatgcag
accatcccgaccttcgtgtatctggtgccggcaatgatcctgctcggtctcggcatggtc
ccgggcttggttgccaccgtcgtctttgctcttcccgcaccgatccgcatgactcgcctc
ggcatcatttccactcccccttcgctggtggaggcagctgaatccttcggtgcgacgcct
cgccaggttctgcgcaaggtcgagctgcccttcgccacgccgcagatcatggctggcctg
acgcagaccatcatgctgtcactctcgatggtctcgatcgcggcactcgtcggcgccccc
gggctcggcgtgcccgtactgcgcgcactgaatagcgtcaatgtcgccaagagcttcgat
tccggcgcctgcatcgtcatcctggcgatcattctcgaccgtatgttccgcgcgcccggc
gaaggagaccactcatga
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