Rhizobium tropici: RTCIAT899_CH13975
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Entry
RTCIAT899_CH13975 CDS
T02432
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtr03009
]
RTCIAT899_CH13975
Enzymes [BR:
rtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RTCIAT899_CH13975
Ribosome biogenesis [BR:
rtr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RTCIAT899_CH13975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AGB72173
LinkDB
All DBs
Position
2806941..2807966
Genome browser
AA seq
341 aa
AA seq
DB search
MSDPFKEAADNRKVLTADENAEGRLDSWLTAEIGEEFSRSRVQGLIKEGAVTLEGAAVTD
AKRKVRPGDVYEITLPEPEDPTPQGEDIPLDVLYEDDDVIVISKPAGLVVHPGAGNWSGT
LVNALIHHCGNSLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDVAHRHLSLQFADHGRTTS
LERAYQAIVWGRPRQLVGTIDAPLGRSSSDRTRRAVKRPDSQDADEAITHYEVLERFHET
PDATALASLIECHLETGRTHQIRVHMAHIGHPLLGDAVYGGGFKTKANLLPEVAKQAVHR
FTRQALHAYMLQFEHPRTGEVMHFEAPLPEDMEELAAALRG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacccctttaaagaagccgcggacaatagaaaagtcctaaccgccgatgaaaat
gctgaaggacggctcgattcctggctgacggccgagatcggcgaggaattttcccgcagc
cgcgtgcaaggactcatcaaggagggcgccgttacgcttgagggcgctgcggtgacagac
gccaaacgcaaggtgcgccccggcgacgtctatgagatcaccctacccgagccggaagat
ccgacaccgcagggcgaagatatcccgctcgacgtgctctacgaggacgacgatgtcatc
gtcatctccaagccggcagggttggttgttcatcccggcgccggcaattggagcggaaca
ttggtcaacgcgctgatccatcattgcggcaacagcctttccggcatcggcggcgtccgc
cgccctggcatcgtacaccggctggacaaggatacgaccggcgtcatggtcgtcgccaag
aacgatgtggcccaccggcatctctccctgcaattcgccgatcacggccgcacgacctcc
ctggagcgtgcctatcaggcgatcgtctggggacgtccccgccagctcgtcggcactatc
gatgcccctctcggccggtcgagcagcgaccgcacgcgccgcgccgtcaagcgtccggat
tcgcaggatgccgacgaggcgatcacgcattacgaggtgctggagcgctttcacgagacg
ccggacgcgaccgcgcttgcctcactgatcgagtgccatctggaaaccggccgaacgcac
cagatccgcgtgcacatggcgcatatcggccacccgctgctcggcgacgccgtttacggc
ggtggcttcaagaccaaggccaatctcctgccggaagtcgcaaaacaggccgtccatcgt
ttcacgcgccaggcactgcatgcctatatgctgcaattcgagcatccccgtaccggcgaa
gtcatgcatttcgaggcacctttgcctgaggatatggaagaactggcggcggcgctcaga
ggatag
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