KEGG   Rhizobium tropici: RTCIAT899_CH13980
Entry
RTCIAT899_CH13980 CDS       T02432                                 
Symbol
rpoH1
Name
(GenBank) alternative sigma factor RpoH1
  KO
K03089  RNA polymerase sigma-32 factor
Organism
rtr  Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtr03021]
    RTCIAT899_CH13980 (rpoH1)
Transcription machinery [BR:rtr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RTCIAT899_CH13980 (rpoH1)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-ProteinID: AGB72174
LinkDB
Position
2808333..2809241
AA seq 302 aa
MARNTLPSIAAGEAGLNRYLDEIRKFPMLEPQEEYMLAKRYAEHADRQAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVTEIATKLNVSEEEVVSMNRRL
SGDASLNAPIKASEGDSGQWQDWLVDDHDSQEDVLIEQDELDTRRRMLARAMGVLNDRER
RIFEARRLAEEPVTLEDLSSEFDISRERVRQIEVRAFEKVQEAVQKDALERAKALRVVEA
TA
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcccgtaataccttaccgtccatcgctgccggagaagccggcctcaatcgttatctc
gacgagatccgcaagttcccgatgctggagccgcaggaagagtatatgctcgccaagcgc
tacgcggaacatgccgaccgtcaggctgcgcataagctcgtcaccagccatctgcgcctc
gtggcgaagatcgctatgggctatcgcggctatggcctgccgatcggcgaagtcgtgtct
gaaggcaatgtcggcctgatgcaggccgtcaagaagttcgacccggaacgcggtttccgt
ttagcaacctatgccatgtggtggatcaaggcctcgatccaggagtatatcctgcgctcg
tggtcgctggtgaagatgggcacgacggccaaccagaagcgcctgttcttcaacctgcgc
cgcctgaagggccgcatccaggccatcgacgacggcgatttgaagccggagcatgtcacc
gagatcgccaccaagctgaacgtctcggaggaggaggtcgtttcgatgaaccgccgcctc
tccggcgacgcttcgctgaacgcaccgatcaaggcttccgaaggtgattccggccagtgg
caggactggctcgtcgatgatcacgacagccaggaagacgtgctgatcgaacaggacgag
ctcgatacccgccgccgtatgctggcccgcgccatgggcgtgctgaacgaccgtgaacgc
cggatcttcgaggcacgccgcctcgccgaggagccggtaacgctggaggacctgtcgtcc
gagttcgacatcagccgcgaacgcgtacgccagatcgaggttcgcgccttcgaaaaggta
caggaagccgtgcagaaggatgcgctggaacgtgccaaggcgctgcgcgttgtcgaagca
acagcgtaa

DBGET integrated database retrieval system