Rhizobium tropici: RTCIAT899_CH14520
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Entry
RTCIAT899_CH14520 CDS
T02432
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rtr
Rhizobium tropici
Pathway
rtr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RTCIAT899_CH14520 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtr03016
]
RTCIAT899_CH14520 (trmU)
Enzymes [BR:
rtr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
RTCIAT899_CH14520 (trmU)
Transfer RNA biogenesis [BR:
rtr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RTCIAT899_CH14520 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
NAD_synthase
DUF7411
ATP_bind_3
ThiI
Motif
Other DBs
NCBI-ProteinID:
AGB72278
LinkDB
All DBs
Position
complement(2920648..2921847)
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AA seq
399 aa
AA seq
DB search
MNTLDFDKRPEDTRVVVAMSGGVDSSVVAGILKRQGYDVLGITLQLYDHGAAVHRAGSCC
AGQDIDDARRVCETLGIPHYVLDYEKRFRETVINPFAESYVAGETPIPCVACNQTVKFAD
LLLTAKELGADALATGHYIRSRPNPSTEHPNRRALYRPADADRDQSYFLFATTQEQIDYL
RFPLGGMPKAETRALAEEMGLVVAKKADSQDICFVPQGKYSDVIAKLKPNAALAGEIVHL
DGRVLGQHEGILHYTIGQRRGIGVATGEPLYVVYLDARSRRVIVGPKEALETHRVYLRDV
NWLGDEPLEQAASGAGFACFAKVRSTRAPSPAVLHADASGIYVDLAVGEAGVAPGQACAL
YSAPGDDARVYGGGFIERSEREPMAEASLKALLAGPVAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgaatacactggattttgacaagaggccggaagatacccgcgtcgtcgtcgccatgtcg
ggcggtgtcgacagttccgtcgtcgccggcattttgaagcggcagggttacgatgtgctc
ggcatcacgctgcagctctatgaccatggcgcggccgtgcatcgcgccggctcctgttgc
gccggccaggatatcgacgatgcgcgccgcgtctgtgaaacgctcggtattccgcattac
gtgctcgattatgaaaagcgtttccgtgagacggtcatcaatcccttcgccgaaagttat
gtggccggcgaaacgccgatcccctgcgttgcctgcaaccagacggtcaagttcgccgat
cttctgctgactgccaaggaactcggcgccgatgcgctggcgaccggccactacatccgt
tcgcgtccgaatccatcgacggagcacccaaatcgccgcgcgctctatcgcccggccgat
gccgatcgcgaccagagttattttctctttgcgacgacgcaggagcagatcgattatctg
cgctttccgctcggcggtatgccgaaggccgaaacccgcgcgcttgccgaggaaatgggc
ctggtcgtcgccaagaaggccgacagccaggacatctgtttcgtgccgcaaggcaaatat
tccgacgtcatcgccaagctgaagccgaatgcggcgcttgccggcgagatcgtgcacctc
gacggccgcgtgctcggccagcacgagggtatcctgcattacacgatcggccagcgccgc
ggtatcggtgttgccacgggcgagccgctttacgtcgtctatctcgacgcccgctcgcgc
cgcgtcatcgtcggcccgaaggaggcgctggaaacgcaccgcgtctatctgcgtgatgtc
aactggcttggcgacgaaccgctggagcaggccgcttccggcgcgggctttgcctgtttc
gccaaggttcgctccacccgcgcaccgtcgccggctgtgctgcatgccgatgccagcggc
atctatgtcgacctcgccgtcggtgaggcaggcgtggctccgggccaggcctgcgcgctc
tattctgcacccggtgatgacgctcgcgtctacggcggcggcttcatcgagcgttcggaa
cgcgagccaatggcagaggcgtcgttgaaggcgctgctggcgggtcctgtcgccgcctga
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integrated database retrieval system
