Rhizobium tropici: RTCIAT899_CH15605
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Entry
RTCIAT899_CH15605 CDS
T02432
Name
(GenBank) transcription activator effector binding protein
KO
K13653
AraC family transcriptional regulator
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtr03000
]
RTCIAT899_CH15605
Transcription factors [BR:
rtr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RTCIAT899_CH15605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GyrI-like
Cass2
HTH_18
HTH_AraC
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AGB72494
LinkDB
All DBs
Position
3151217..3152062
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AA seq
281 aa
AA seq
DB search
MKMSAIGRAIWFIESHFKSDISLEEIAEIAGLSRFHLSRVFGMTTGHSISSYIRSRRLSE
AALVLTDGSSSILQVALDAGYGSHEAFTRAFREQFGMTPENLRKQGHVRNLALQEPIRMD
DTRLPKLEAPRFESHPAMLLAGLAETYAYEATQAIPSLWQKFNQYFGHIPGQIGNVAYGV
CTQAEEGSESFRYMSAAEVSAADGLPEGFATTKLPQQRYAIFTHRGHISGISSTVDQIFS
EWLPQSGQQHGGTPDMMERYDDRFDSRTGTGVTEIWIPLKA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatgagcgcgatcggcagagcgatatggtttatcgaaagccattttaaatccgac
atctcgctcgaagagatcgccgagatagccgggctgtcgcgctttcatctttcgcgcgtc
ttcggcatgacgacgggccactcgatcagcagctatatccggagccgccgccttagcgaa
gcggctcttgtactgacggacggctcctcctccattctccaggttgccctcgatgcgggc
tatggttcgcacgaggctttcacccgtgccttccgcgagcaattcggcatgacgccggaa
aacctgcgcaagcaggggcacgttcgcaacctcgctctacaggaaccgatcagaatggac
gacacccgccttcccaaactcgaggcaccgcgcttcgaaagccatcccgcaatgctgctt
gccggccttgcggaaacctatgcctatgaggcgacacaggccatcccctcgctctggcag
aaattcaaccagtatttcggccatattcccggccagatcggcaatgtcgcctatggcgtc
tgcacccaggcggaagaaggtagcgaaagcttccgttacatgtcggcagccgaagtttcc
gccgcggacggcctgcccgaaggtttcgcgacgacgaaactgccgcaacagcgctacgcg
atcttcacgcatcgcggccatatctccggtatttccagcaccgtggatcagatcttcagc
gaatggctcccgcaatcgggccaacaacacggcggcaccccggatatgatggaacgctat
gacgaccgcttcgactcacgcacgggcacgggcgtgacggaaatctggatccccctcaaa
gcctag
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