Rhizobium tropici: RTCIAT899_CH15650
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Entry
RTCIAT899_CH15650 CDS
T02432
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RTCIAT899_CH15650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_CH15650
Transporters [BR:
rtr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RTCIAT899_CH15650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
TOBE_3
AAA_30
SMC_N
AAA_22
nSTAND_NTPase5
AAA_29
AAA_16
ABC_ATPase
nSTAND1
MIT_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AGB72503
LinkDB
All DBs
Position
3160568..3161554
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AA seq
328 aa
AA seq
DB search
MNAVRFQQVSRHFGQVRAVDHVDLEIAPGEFFAMLGPSGSGKTTCLRLIAGFEQPTGGHI
EIFGETAEGVPPYRRNVNTVFQDYALFPHLNILDNVAYGLMVKGIGKAERLKAAEQALEL
VKLPGYGARRPGQLSGGQRQRVALARALVNKPKVLLLDEPLGALDLKLREQMQEELKSLQ
RALGITFVFVTHDQGEALSMADRVAVFNDGRIVQQGTPHDIYQRPKTRFVADFVGSSNVI
APETMSSLGGERRWASLRPEAIRLTEESGVAATVKTTSFLGAATRLSVEANGTRLHVTVP
AGQLAPDTGASVRLAWLPADVHYMDDAA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgttcgcttccagcaggtgtcgcgccatttcggccaggtccgcgctgtggac
cacgtcgatctggagatcgcgcccggcgaattcttcgccatgctcggcccttccggttcc
ggcaagaccacttgcctccggctgatcgcgggttttgagcagccgacaggcgggcatatc
gaaatctttggcgaaaccgccgaaggcgtgccgccctatagacgcaacgtcaacacggtc
ttccaggattatgcgctctttccgcatctcaatatcctcgacaacgttgcctacgggttg
atggtcaagggtatcggcaaggccgaacggctgaaggccgccgaacaggcgctggagctg
gtgaaactgcccggctatggcgcccgccgccccggccagctctccggcggccagcggcag
cgcgtggcgctcgcccgcgcgctggtcaacaagccgaaagtgctgctgctcgacgaaccg
ctcggcgcgctcgacctgaaactgcgcgagcagatgcaggaggagctgaagagcctgcag
cgcgcgctcggcatcaccttcgtcttcgtcacccacgatcagggcgaagccttgtccatg
gccgaccgcgtcgccgtcttcaacgacggccgcatcgtgcagcagggcaccccgcacgac
atctatcagcgaccaaagacccgcttcgtcgccgatttcgtcggctcctccaatgtcatt
gcccccgaaaccatgtcgtcgctcggcggcgaacggcgttgggccagcctgcgccccgaa
gccatccggttgactgaggagagcggcgtggcggcgaccgtgaaaacgacaagctttctc
ggtgccgctacccgcctctccgtcgaagcaaacggcacccggctgcatgtgacggtaccc
gccggacaactagccccggataccggcgcatccgtccgcctcgcatggctgcctgccgat
gtgcactacatggatgacgccgcatga
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