Rhizobium tropici: RTCIAT899_CH16525
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Entry
RTCIAT899_CH16525 CDS
T02432
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtr03036
]
RTCIAT899_CH16525
Chromosome and associated proteins [BR:
rtr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RTCIAT899_CH16525
BRITE hierarchy
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AGB72669
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Position
3336308..3337297
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AA seq
329 aa
AA seq
DB search
MSAPAENIRAGKRDLGRVHLEAFLEMMSAERGAAVNTLQSYERDLDDLHSFLSGQGVRLT
EASPGDLAAYLSSLSSQGFKPSSQARRLSAMRQFYKFLYAEGLRTDDPTGILDAPKKGRA
LPKTMGVDEVTKLLTQAEREAALEGPDQLQRLRMLVLLEMLYATGMRVSELVSLPAKVLD
QEGRFLMIRGKGNKERLVPLSQTAISALKAYGRLQAAISANAKQPLPESPWLFPAASKQG
YLPRQVFARDLKDLAIRAGLTPSMISPHVMRHAFASHLLANGADLRVVQELLGHSDISTT
QIYTHVLEERLHQLVQTHHPLAKQAKKQD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccagctgagaatatacgagcgggcaagagggatctggggcgagtgcacttg
gaagcctttctggagatgatgagcgccgagcgaggtgctgccgttaacacgctgcaatcc
tacgagcgcgatctcgacgatctccattcatttctttccgggcagggcgtccgcttgacg
gaggcaagccccggtgatctggccgcctatctttccagcctgtcgagccagggcttcaag
ccatcctcccaggcacgccgcctctccgccatgcggcagttctacaagttcctctatgcc
gaaggtctgcgcacggacgatcccaccggaattctcgatgcgccgaagaaaggccgcgcc
cttccgaagacgatgggcgtcgatgaagtgacgaagcttctgacccaggcggagcgggaa
gcggcgctcgaagggcccgatcagctgcagcgcctgcgcatgctggtgcttctggaaatg
ctttacgccaccggcatgcgcgtcagcgagctcgtctccctgccggcgaaagtcttggat
caggaaggacgcttcctgatgatccgcggcaaaggcaacaaggagcggctggtgccgcta
tcgcagaccgccatttcggccctgaaggcctatgggcgtctgcaggccgccatttcagcc
aatgccaagcagccgctgccggaaagcccctggcttttccccgccgcgtccaagcagggg
tatctgccgcggcaggtctttgcacgcgatctcaaggatcttgccatccgggccggcctg
acgccttcgatgatttcgccgcatgtgatgcgccatgccttcgcgagccatcttctcgcc
aacggcgcagacctgcgcgtggtgcaggaacttctggggcattcggacatttcgacgaca
caaatctacacacatgtactggaagaacgccttcatcagctggtccaaacgcatcacccc
cttgccaaacaggcaaaaaaacaggattag
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