Rhizobium tropici: RTCIAT899_CH17560
Help
Entry
RTCIAT899_CH17560 CDS
T02432
Name
(GenBank) resistance nodulation cell division (RND) drug efflux pump, inner membrane component
KO
K07788
multidrug efflux pump
Organism
rtr
Rhizobium tropici
Pathway
rtr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RTCIAT899_CH17560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_CH17560
Transporters [BR:
rtr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RTCIAT899_CH17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
AGB72874
LinkDB
All DBs
Position
complement(3554548..3557667)
Genome browser
AA seq
1039 aa
AA seq
DB search
MNVSSLFIFRPIATSLLGVAVLLGGILGFLFLPVAPLPQVDFPTIQVTTQLPGADPDTMA
ALVTAPLERPLGQIPSLASMTSSSAFGISQITLQFDLGRDIDGAAQDVQAAINAAGSTLP
RTLPYPPTYSKVNPADTPIVTLALRSNSYSIRELSDFADTMMAQRLSEVSGVGDVNIQGG
VKPAIRIQVDLPRLASYGLALEDIRSAITNASVAGAKGSLDGTQQSFTLAANDQIVDPNV
YKSVIVAYRNSAPVQLKDVATVVEGLENNRVGAWYQGQPAVILDIMRQPGANVIQTVENV
LKQIPKLKQAMPAGISLDIVNDRTETIRASIHDVQWTLVISIGLVILVVLLFLRTMTATF
IAGVALPLSLIATFGVMWFAGFSLDNLSLMALTIGTGFVVDDAIVMIENIARHIEEGENP
MQAALKGAGEIGFTIISLTVSLVAVFIPLLFMTGIVGRMFREFALTLTIAVVVSAVVSLT
LTPMMCARILRKPKEHQGGFLAGADRFTDWMVEGYRRSLVWAVDRSRLMLLVTVVTLAAT
IALYVVIPKGFLPAQDTGLITAVIEAEPTTSFETMKQIQADVVDRLRKDPDVTSVVAVIG
ASASNLTLNTGNLSLVLKPRSERNASADQIIDRMRGEVTGLPGIHVTFQSVRDISISTRA
SRAPYQYTLTGTDTNTVVDWAQKLAQRLQESPKLTDIASEVEMGGGRIFVDVNRETASRL
GVSMQAVSDTLNDAFGQRQIATIYGQANQYRVILEAAPQYQSDPKSLDKLYVAGASDTQV
PLNAFTTASFTTAPLVISHDEQFPAVTLSFDLAKGASLSDAVAEIKAAERDIEMPDNIQR
KYSGDAEEFASSLAGEPWLILAAIVTIYIVLGLLYESAVHPVTILSTLPSAGVGALLALM
LFGQDLSIIALIGIVLLMGIVKKNAIMMIDFALEAERKEGLEPREAILKASILRFRPIMM
TTLAALFGALPLALAQGTGAELRIPLGITIIGGLVLSQLLTLYTTPVIYLAFERLRAKVV
GRTSGTPSAEMNELAGGER
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcgtcgctcttcatcttcaggccgatcgccacctcgcttctcggggtggcg
gttctgttgggcggcattctcggcttcctcttcctgccggttgcgccactgccgcaggtg
gattttccgacgatccaggtgacgacgcagcttccgggtgccgatcccgatacgatggcg
gcgctggtgaccgcaccgttggagcggccgctcggccagatcccgtcgctcgcctccatg
acctcgtcgagtgccttcggtatcagccagatcacactgcaattcgatctcggccgcgat
atcgatggcgccgcgcaggatgtgcaggcggcgatcaatgccgcgggatcgactttgcca
cgcacgctgccttatccgccgacctactcgaaggtgaacccggccgatacgccgatcgtg
acgctggcgctgcgctccaacagctattcgatccgcgagctcagcgatttcgccgatacg
atgatggcgcagcgcctgagcgaagtctcaggtgttggcgacgtcaacatccagggcggc
gtcaagccggccatccgcattcaggtggacctgccgcgtctcgcttcctacgggcttgcg
ctggaggatatccgttcggcgatcaccaacgccagcgttgccggcgccaagggctcgctc
gatggcacgcagcagagcttcacgctcgcggccaacgatcagatcgtcgatccgaacgtc
tataaatcggtcatcgtcgcctaccgcaacagcgcgccggtgcagttgaaggacgtcgca
acggtcgtcgaggggctggagaacaatcgtgtcggcgcctggtatcagggtcagcccgcc
gtcattctcgatatcatgcgccagccgggcgccaacgtcatccagacggtcgagaacgtg
ctgaagcagatcccgaagctgaagcaggcgatgccggccggtatttcgcttgatatcgtc
aatgaccgcaccgagacgatccgcgcctcgatccatgacgtgcagtggacgctggttata
agcatcggcctcgtcatcctggtcgtcctgctattcctgaggacgatgacggcgaccttc
attgccggtgttgcgctgccgctgtcgctgatcgcgaccttcggcgtcatgtggtttgcc
ggcttcagcctcgacaatctctcgctgatggcgctgacgatcggcaccggcttcgtcgtc
gacgacgccatcgtgatgatcgagaatatcgcccgtcatatcgaagagggcgaaaatccg
atgcaggcggcgctcaagggcgccggcgagatcggtttcaccatcatttcgctcaccgtc
tcgctggttgccgtcttcattccgctgctgttcatgaccggcattgtcggccgcatgttc
cgtgaattcgcactgacgctcaccattgccgtcgtcgtgtcggccgtcgtctcgctgacg
ctcacgccgatgatgtgcgcgcgcatcctgcgcaagccgaaagagcatcagggcggcttt
ctggccggtgccgaccgtttcaccgactggatggtcgaaggctatcggcggagccttgtc
tgggccgtggatcgcagccgcctcatgctgctggtgacggtggtgacgctggctgcgacg
atcgcgctctatgtcgtcattcccaagggcttcctgccggcgcaggatacgggtctcatc
accgccgtcatcgaggccgagccgacgacctccttcgagacgatgaagcagattcaggcc
gatgtagtcgaccggctgcgcaaggatccggatgtcaccagcgtcgttgccgtcatcggt
gcgagtgccagcaatctgacgctgaataccggcaatctcagtctcgtgctgaagccgcgg
agtgagcgtaacgcgtccgccgatcagatcatcgacaggatgcgcggcgaggtgacgggc
ttgcccggcatccatgtcaccttccagagcgtgcgcgacatctcgatcagcacgagggcc
agccgtgcgccctatcagtataccctcacgggcaccgacacgaatacggtggtcgactgg
gcgcagaagcttgcccagcggctgcaggaaagtccgaagctcacggatatcgcctccgaa
gtggagatgggcggcgggcgcatcttcgtcgatgtcaatcgcgaaaccgcctctcggctc
ggcgtgtccatgcaggccgtcagcgatactttgaatgatgctttcggccagcggcagatc
gcaacgatctatgggcaggccaaccagtatcgcgtcattctggaggcggcgccgcaatat
cagtccgacccgaaatcgctcgacaagctttatgtcgccggtgccagcgatacccaggtg
ccgctcaatgccttcacgacggcgagtttcacgaccgcgccgctggtcatcagtcatgat
gagcagtttccggccgtgacgctcagcttcgacctcgccaagggcgcgtcgctcagcgat
gccgtcgccgagatcaaggcggcggaacgcgatatcgagatgcccgacaatatccagcgc
aaatattcgggcgatgccgaggaatttgcctcgtcgctggcgggcgagccctggctgatc
ctcgcggcaatcgtgacgatctacatcgtgctcggtctgctctatgaaagtgccgttcat
ccggtgacgattctttcgacgctgccttcggctggcgtcggcgcgctgctggcgctgatg
ctgttcgggcaggatctctcgatcatcgcgttgatcggcatcgtgctcctgatgggtatc
gtcaagaagaatgcgatcatgatgatcgactttgcgctggaggcggagcgcaaggaaggc
ctggagccgcgcgaggccattctgaaagcctcgatcctgcgtttccggccgatcatgatg
acgacgctcgcggcgctcttcggcgccttgccgctggcgctggcgcagggcacaggcgca
gagttgcgcattccgctcggtatcaccattatcggcggtctcgtgctttcgcagcttttg
acgctctatacgacgccggtgatctatctcgccttcgagcggctgcgcgccaaggtcgtc
ggccgcaccagcggcacgccgagcgccgagatgaatgaattggcgggtggcgagagatga
DBGET
integrated database retrieval system
