Rhizobium tropici: RTCIAT899_CH17965
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Entry
RTCIAT899_CH17965 CDS
T02432
Symbol
rpoH2
Name
(GenBank) alternative sigma factor RpoH2
KO
K03089
RNA polymerase sigma-32 factor
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtr03021
]
RTCIAT899_CH17965 (rpoH2)
Transcription machinery [BR:
rtr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RTCIAT899_CH17965 (rpoH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
KORA
Sigma70_r3
HTH_23
HTH_10
HTH_3
DUF2802
HTH_25
GerE
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AGB72955
LinkDB
All DBs
Position
complement(3652210..3653073)
Genome browser
AA seq
287 aa
AA seq
DB search
MTNMSADRRMIKVAMAAPYLARDEEHDLAMRWKDHDDRGARNQIATAHMRLVISMAGKFR
NFGLPMSDLVQEGYVGLLEAAARFEPEREVRFSTYASWWIRASIQDYILRNWSIVRGGTS
SAQKALFFNLRRLRAKLARSNSNVTVQSIHEEIAVTLGVSLTDVQTMDARLSSSDTSLQA
PSIAGDSESAERIDFLISDEPLPDEQVSDMIDGERRRVWLASALKHLNEREMKIIQARRL
VEDGATLEELGADLGISKERVRQIESRAMDKLRNALVDADPRMASYA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatatgtctgcagatcggcgcatgatcaaagttgccatggctgctccctatctc
gctcgcgacgaagaacacgatctcgccatgcgctggaaagaccacgacgatcgcggcgcc
cgcaatcagatcgcaactgcccatatgcgcctcgtcatttccatggcggggaagtttcgt
aacttcggactgccgatgagcgatctggtgcaggaaggctatgtcggcctgctggaagcg
gccgcccgcttcgaaccggagcgggaagttcgcttctccacctatgcaagctggtggatc
cgcgcttcgatccaggactatatcctgcgcaattggtcgatcgtgcgcggcggcacgagt
tccgcccagaaggcgctgtttttcaatctgcgccgcttacgcgccaagcttgcccgcagc
aattccaacgtcaccgtccagtccatccatgaggaaatcgccgtgacgctcggcgtcagc
cttacggatgtgcagacgatggatgcgcgcctctccagtagcgatacctccctgcaggcc
ccctccattgccggcgattccgaaagtgccgagcgcatcgattttctgatcagcgacgag
ccgcttcccgacgagcaagtgtccgacatgatcgacggcgagcgccgccgtgtttggctg
gcgtcggcgctgaaacatctcaacgaacgtgaaatgaagatcatccaagcgcgccgcctg
gtcgaagacggcgcgacgctcgaagagctcggtgccgatcttggcatttccaaggagcgc
gtgcgccagatcgaaagccgcgcgatggacaagctccgcaacgccctggtggatgcggat
ccccgcatggccagctatgcctga
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integrated database retrieval system
