Rhizobium tropici: RTCIAT899_CH18320
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Entry
RTCIAT899_CH18320 CDS
T02432
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00521
Streptomycin biosynthesis
rtr00523
Polyketide sugar unit biosynthesis
rtr00525
Acarbose and validamycin biosynthesis
rtr00541
Biosynthesis of various nucleotide sugars
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
rtr01250
Biosynthesis of nucleotide sugars
Module
rtr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RTCIAT899_CH18320 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RTCIAT899_CH18320 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RTCIAT899_CH18320 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RTCIAT899_CH18320 (rfbB)
00525 Acarbose and validamycin biosynthesis
RTCIAT899_CH18320 (rfbB)
Enzymes [BR:
rtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RTCIAT899_CH18320 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGB73024
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All DBs
Position
complement(3737856..3738923)
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AA seq
355 aa
AA seq
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MTILVSGGAGFIGGNFVLDWLERHDETVVNLDKLTYAGNLDTLKGLKGDDRHVFVHGDIG
DRELVSDLLSMHRPRAVINFAAESHVDRSIHGPGDFIQTNIVGTFNLLEAVRGYWDGLPD
GEKQGFRFLHVSTDEVYGTLSQDDAPFNEVNRYEPNSPYSASKAASDHLVRAWHHTYGLP
VLTTNCSNNYGPYHFPEKLIPLVILNALSGKNLPIYGDGQQIRDWLYVRDHCSAIRRVLE
VGKLGETYNVGGWNEKPNLDVVQTICAILDELRPKADGGRYSDQITFVKDRPGHDRRYAI
DARKLERELGWKPAETFETGIRKTIAWYLENQDWVRNVTSGAYREWVGKQYEVEL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgatattggtttcaggtggagccgggtttattggcgggaactttgtccttgactgg
cttgagagacatgacgagacggtcgtcaatctggacaagctgacctatgccggcaatctg
gatacgctgaaggggttgaagggtgatgatcgccatgtgttcgtgcatggcgatattggc
gatcgcgagctggtgagcgatttgctgtcgatgcaccggccgcgcgcggtcatcaatttc
gcagccgaaagtcatgtcgatcgctccatccacggtcccggcgatttcatccagacgaat
attgtcggtaccttcaatctgctggaagccgtgcgcggctattgggatggcttgccggac
ggggagaagcaaggctttcgctttctgcatgtctcgacggatgaggtctatggcacgctg
tcgcaggatgatgcaccgttcaatgaggtcaatcgctatgagccgaacagcccctattca
gccagcaaggcggcctccgatcatcttgtgcgggcgtggcatcatacttatggcctacct
gtcttgacgacgaactgcagcaacaattacggaccttaccattttccggaaaagctgatc
ccgctggtgatcctgaacgcgctttcgggaaagaacctgccgatctatggcgatggccag
cagatccgcgactggctgtacgtccgagatcattgcagcgccattcgccgcgtcctggaa
gtcggcaagctcggtgaaacctataatgtcggcggctggaacgagaagcccaatcttgat
gtcgtgcagacgatctgcgccatcctcgatgagctgaggccgaaggccgatggcggccgc
tacagtgatcagatcaccttcgttaaggatcggcccggtcacgaccgtcgttatgcgatc
gatgcccgcaagctcgagcgcgaactcggctggaagcccgcggaaaccttcgagaccggc
attcgcaagacgatcgcttggtatctcgaaaaccaggactgggtccgtaacgtcaccagt
ggtgcctatcgtgaatgggtcggcaagcagtacgaggttgagttgtga
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