Rhizobium tropici: RTCIAT899_CH18520
Help
Entry
RTCIAT899_CH18520 CDS
T02432
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rtr
Rhizobium tropici
Pathway
rtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RTCIAT899_CH18520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtr03019
]
RTCIAT899_CH18520
Messenger RNA biogenesis [BR:
rtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RTCIAT899_CH18520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
AGB73062
LinkDB
All DBs
Position
3784947..3785486
Genome browser
AA seq
179 aa
AA seq
DB search
MSTPHASVRAEDLPYRPCVGIMILNREGLVWAGHRIPVGNSEYDGSPQLWQMPQGGIDEG
EDPLKAAYRELYEETGMKTVTLLAEARDWINYDLPPQLIGIGLKGKFRGQTQRWFAFRFD
GDEGEIAINPPPGGHEPEFDAWEWKPMAVLPDLIVPFKRSVYEQVVSEFSHLANLKAED
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccccacgcctccgtgagagccgaagacctgccctaccgtccctgtgtcggc
atcatgatcctgaaccgggaaggcctggtctgggccggacaccgcattccggtcggcaat
tccgaatatgacggctcgccgcagctctggcagatgccgcagggcggcatagacgagggc
gaagacccgctgaaagcggcctatcgcgaactatacgaagaaacgggcatgaaaaccgtg
accctgctggcggaagccagggactggatcaattacgatcttccgccgcagctgatcggc
atcggcctcaaggggaaattccgcggccagacgcagcgctggtttgccttccgcttcgac
ggcgacgaaggggagattgccatcaatccgccgccgggcggccacgaaccggaattcgat
gcatgggaatggaagcccatggcggtacttcccgacctgatcgttcccttcaaacgctcg
gtctacgagcaggtggtttcggaattcagtcacctggccaatctgaaagccgaagactga
DBGET
integrated database retrieval system
