Rhizobium tropici: RTCIAT899_PA00460
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Entry
RTCIAT899_PA00460 CDS
T02432
Name
(GenBank) deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_PA00460
Enzymes [BR:
rtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RTCIAT899_PA00460
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RTCIAT899_PA00460
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
AHL_synthase
Motif
Other DBs
NCBI-ProteinID:
AGB73189
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All DBs
Position
pRtrCIAT899a:complement(85012..86586)
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AA seq
524 aa
AA seq
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MLRDEGKGEAATVETLVFILGDQLSHSISSLDGFNSASDAILMCEVMAEATYVGHHKKKI
AFIFSSMRHFAQELRDRGYHVRYVTIDDPANSGSFDGELRRAVSDMCPKSIQLTEPGEWR
VHEIVCGWQASLNTPVKIVEDKRFICSKAEFAAWAAGRKTFVMEFFYREMRRKTGLLMQG
DEPVGGKWNFDTENRRPANPDMFRPERRVTSQDAVTDEVIGIVGRLFPDNFGELNDFNFA
VTSSEAIRISDDFLRNHLAEFGSTQDAMLADDPFLNHSLLSFYINVGFIDPLDLCRRAES
AYLDGRAPLNSVEGFIRQIIGWREYMRGIYWLSMRAYREMNFFNSERPLPAFYWSGETDM
NCVATVVRETRANAYAHHIQRLMITGNFALIAGVDPRQVHEWYLEVYADAYEWVEVPNVI
GMSQFADGGIVGTKPYAASGKYISHMSDYCANCRFSVEKRTGDDACPFNFLYWDFLARNR
NRLSVNRRLSRQYANWDRMYEADRVEIIESAARYLSKLSQPEGV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgttaagagatgaaggtaaaggcgaggccgcgacagtcgagacactcgtcttcatccta
ggcgaccagctatcccactcaatctccagtttggatggcttcaactccgcatcggatgcc
attctcatgtgcgaggtcatggccgaggcaacctacgtcgggcatcacaagaagaagatc
gctttcatatttagttcgatgaggcatttcgcccaagagcttcgtgataggggctaccac
gtccgctatgttacgattgatgatccagcaaactccggttcatttgatggcgagcttcgc
cgcgccgtcagcgatatgtgtcctaagagcatacagctcacagaacctggcgagtggcgt
gtccatgagattgtctgtggctggcaagcttcattgaacacaccggtaaagatagttgag
gacaagcggtttatctgcagtaaagccgagtttgccgcatgggcggcggggcgaaaaaca
ttcgtaatggagttcttctaccgcgaaatgcggcgtaagaccggcctcctaatgcaaggc
gacgagcctgtcggtggtaaatggaacttcgacactgagaacagacgcccggcaaatcct
gatatgtttcgacccgaacgccgggtcaccagtcaggacgcggtaactgatgaggtaatt
ggcattgttggacggttattccccgacaacttcggcgaattgaatgatttcaactttgcg
gtaacaagttccgaggcgatacgcatctctgatgactttttgcgtaaccacctggccgag
ttcggttccacccaagacgcgatgctggcggacgatccattcctaaatcattccctgcta
tcattctacattaacgtggggttcatcgatcctctcgacctttgcagacgagcggaaagc
gcgtatctcgacggtcgtgcaccactgaattccgtggaaggattcatacggcagatcata
ggctggcgcgaatatatgcgcggtatctattggcttagcatgcgcgcttaccgcgaaatg
aattttttcaacagcgagcggccactccctgcattttattggtcaggcgaaaccgacatg
aactgtgtggccacggtggtgcgcgaaacacgagcgaacgcctatgcgcatcatattcaa
cgcctgatgatcactggcaacttcgctcttatcgcgggtgtcgatcccagacaggtgcac
gagtggtaccttgaagtttatgcggacgcctacgaatgggttgaagtacctaacgtgatc
ggcatgagtcaatttgccgacggtggtatcgtcggtacgaaaccctatgctgcaagcggc
aagtacatatcgcacatgtcggattactgtgccaactgccggttcagcgtggaaaagcga
accggggacgacgcttgtcctttcaattttctttactgggactttctcgcgcgcaaccgc
aaccgcctttccgtaaatcggagactttcacggcaatacgcaaactgggatcgaatgtac
gaggctgatcgcgtggagattatcgaaagcgctgcccgttacctttcaaaactttcccaa
cctgagggagtttga
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