Rhizobium tropici: RTCIAT899_PB00400
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Entry
RTCIAT899_PB00400 CDS
T02432
Name
(GenBank) putative DNA helicase, ATP-dependent, Ku type
KO
K10979
DNA end-binding protein Ku
Organism
rtr
Rhizobium tropici
Pathway
rtr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RTCIAT899_PB00400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtr03400
]
RTCIAT899_PB00400
DNA repair and recombination proteins [BR:
rtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RTCIAT899_PB00400
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Gene cluster
GFIT
Motif
Pfam:
Ku
DUF3228
Motif
Other DBs
NCBI-ProteinID:
AGB73382
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All DBs
Position
pRtrCIAT899b:complement(68801..69238)
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AA seq
145 aa
AA seq
DB search
MPDPMGAENMVGISRLVPSRRERAVMPEPCGKGIVLWTLRYGDEVRDGENYFAAIDDEEP
EAELMPLVQQLIKKQTQRWSPKMVADPMQETLLDIINTKKKQLKKPSKAMPKKKAEALTG
NVINIMDALRKSIENERGSGKQSTR
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaccccatgggcgcagagaacatggtcggcatatcgaggctggtgccttcgcgg
cgggaacgcgccgtcatgcccgagccatgcggcaagggtatcgtgctctggacgctgcgc
tatggtgatgaggtgcgggatggggaaaactattttgccgcaatcgatgatgaagagcca
gaagcggaactgatgccgctcgtgcaacagctcatcaagaaacagactcagcgctggagc
ccgaagatggtcgccgatccgatgcaggagacgctgcttgacattatcaacacaaagaag
aagcaattgaagaaaccgtccaaagccatgccgaagaagaaggctgaagctttgacgggc
aatgtcatcaacatcatggatgcgttgcgcaagtccatcgagaacgaacggggttcaggg
aagcaatcgacgagatga
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