Rhizobium tropici: RTCIAT899_PB00430
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Entry
RTCIAT899_PB00430 CDS
T02432
Name
(GenBank) putative geranylgeranyl diphosphate synthase (farnesyl-diphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00900
Terpenoid backbone biosynthesis
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RTCIAT899_PB00430
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rtr01006
]
RTCIAT899_PB00430
Enzymes [BR:
rtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RTCIAT899_PB00430
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RTCIAT899_PB00430
Prenyltransferases [BR:
rtr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RTCIAT899_PB00430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
AGB73388
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All DBs
Position
pRtrCIAT899b:complement(73483..74481)
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AA seq
332 aa
AA seq
DB search
MQTGSTLHDDQTGISALGGLGAQAPGASGRLLPEIWMQDGAKRVEQALTRLLCPEDDGET
ELMAAMRYATLHGGKRTRALLCLAAGELADTPAHMLDVVGAAIEMMHACTLVHDDLPAMD
DDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLDAPGDNRIALVRELAQAVSAEG
AAGGQAIDLSLVGKHVELGRILAMHRMKTGALVRASVRMGALCAIAEDAANAELYCALDR
YSACFGLALQVVDDIVDATADKATLGKTPGKDAAAQKPTCASIMGLKAARQFVADLLRDA
EDAIAPLGPRAERLAQILQRANAYLFTHAPCA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccggttccacgctacacgatgaccaaactggcatttccgcgctcggcggattg
ggcgcgcaggcgcccggcgcatccggcaggctgctgccggagatctggatgcaggacggc
gcaaagcgggtcgaacaggcgctgacgcgtcttctctgccccgaggacgacggtgagacc
gagctgatggcggcgatgcgctacgctaccttgcatggcgggaagcgcacccgcgccttg
ctctgtctggctgccggcgaactggccgacaccccggcgcacatgctcgacgtcgtcggc
gccgccatcgagatgatgcacgcctgtaccctggtccacgacgacctgcccgcaatggac
gacgacgtgcttcgccgcggccttccgaccgtgcacgtcaagttcggcgaagcaactgcg
atcctggtcggggatgcactgcaggcgcacgccttcctgaccctggcgagccttgatgcc
ccgggcgacaaccgtatcgcgctcgtgcgcgaactggcgcaggcagtgtccgccgagggt
gccgcaggcgggcaggccatagatctgtcgctggttggaaagcacgttgagctgggcagg
atcttggcgatgcaccgcatgaagaccggagcgctagtgcgcgcgtccgttcgcatgggc
gcactatgcgccatcgcggaggatgccgcgaacgctgagctgtactgtgcgctcgatcgc
tacagcgcctgtttcggcctggcgttgcaggtggtcgacgacattgtcgacgcgacagcg
gataaagcgacccttggcaagacgcccggcaaggacgcggcggcgcagaagccgacctgc
gcgtcgatcatggggctaaaggcagcgcgccagttcgtcgcggatctgttgcgcgacgcg
gaggatgccatcgccccgctggggccgcgtgcggaacggttggcgcagatcctgcagcgg
gccaacgcatatctgttcacgcacgcgccatgcgcatga
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