Rhizobium tropici: RTCIAT899_PB01240
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Entry
RTCIAT899_PB01240 CDS
T02432
Symbol
fixK
Name
(GenBank) transcriptional regulator FixK
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RTCIAT899_PB01240 (fixK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtr03000
]
RTCIAT899_PB01240 (fixK)
Transcription factors [BR:
rtr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RTCIAT899_PB01240 (fixK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HTH_11
ComGE
Motif
Other DBs
NCBI-ProteinID:
AGB73521
LinkDB
All DBs
Position
pRtrCIAT899b:225187..225846
Genome browser
AA seq
219 aa
AA seq
DB search
MQSKFMPAAQPWTSPTKIVGPQIGGAHIAVTYERGQEIYAQGGSADKCYRVSTGAVRVCR
ILSNGGRQVVSFHVAGEMFGFEAGSQHRYFAEALALTRIVAFEQGLAQQRHLPELLALAL
EAMERAQEHLLLIGRQSAIERVATFLLDLCERLGGTRQFRLAMSRQDIADYLALTIETVS
RAMSELKEQSIISLRHARMVDIRKPDALRSLCGHVAGLS
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaaattcatgcccgcagcacagccttggacctcgccgacgaaaattgtgggg
ccgcaaattgggggagcgcacatcgccgtcacatatgagcgcggccaagagatatacgcc
cagggcgggagcgccgataagtgctatcgggtttctaccggagctgttcgggtatgtcgc
atcctttccaacggggggaggcaggtcgtctccttccatgtcgcgggggaaatgttcggc
ttcgaagctggctctcagcatcgttactttgccgaagcgctcgccctgacaagaatagtg
gcgtttgaacagggccttgctcagcagcggcatttgccggaactccttgcacttgctctt
gaagctatggaacgtgctcaggaacaccttctgcttatcggacggcagtctgcgattgaa
cgggtggccacatttttgttggatctctgcgagcgcctgggaggcactcggcagtttaga
ttggccatgtcgcggcaggacattgcggactatctcgccttgacgatcgagacggtatcg
cgtgccatgagcgagttgaaggaacaaagcataatcagcctgcgacatgcgcgaatggtc
gacattcggaagcctgatgcacttcgttcgctctgtggccatgttgccggactatcttag
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