Rhizobium tropici: RTCIAT899_PB01850
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Entry
RTCIAT899_PB01850 CDS
T02432
Name
(GenBank) putative polyamine/opine/phosphonate ABC transporter, permease protein
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RTCIAT899_PB01850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PB01850
Transporters [BR:
rtr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RTCIAT899_PB01850
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AGB73625
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Position
pRtrCIAT899b:338596..340368
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AA seq
590 aa
AA seq
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MTTLQRIRSTPMLLTLPAFAVLFAIFGIPMLLLFATSLNAPNLSFANYIAFFEQRSFVLI
LIQTFKISFIATALCLIIGYPTAYLITIAGRARPILLVLVFLPWLTSALVRTYAWTVVLG
DSGLINRVLLNSGIIDSPLSLIYNRFAVYVGMVHIMLPMMILPIVSVMMSIDTSLMAAAR
SMGAKPFTAFLRVFVPLSIPGVRSGCILVFVVCLGFYITPQALGGLGDTMLSTLINSQLT
TSLNIAATAAAAFILLAMALAVLSVAGVNLAGAHGQPASSEQNARRRKLPSFDKASRYLN
EFLVPYRARRWAAKLHQAQRETPWSKIAGAAFLAVVVIYLLAPGFIVIIVSLNAGEFLEF
PPKAVSLRWYYSFFNDPSWIGALWNSFQFGVIVSVVSTIVGTLAAFGLSRCSSRLRSGLT
MVILTPITFPIIVVGVAVYTGLAKLGLVGTNTGIILGQTIGAIGYVVVIVLATLAGFDRR
LEQAAMSMRAGPTQTFMRVTLPLIRSGIIGGALFAFLASFDEVIITSFVSGYAIPTLPLK
MLENLKQQLDPTIAAVGALLTMLPIVWLVALYFTLWRGRGALKSAPVAAT
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacttcagagaatccggtccacgccgatgttgctaactttgccagcgttcgct
gtgctgtttgcgattttcggcatacccatgctccttcttttcgcgaccagcctcaatgcg
ccaaatctgtcttttgcgaattatatcgcttttttcgaacagcgctcatttgtcctgatc
ctgattcagaccttcaagatcagcttcatagccacggcactttgtttgatcatcggctac
ccgacggcttatttgattacgatcgccggccgtgcaagaccaatcctcctggtgcttgtc
ttcctaccttggctgacgagtgctctggttcggacctacgcatggactgtcgtcttgggt
gatagtggattgatcaaccgcgtgttgctcaattcgggcataatcgatagccctttgtct
ctcatctataatcgtttcgctgtttatgttggcatggtgcatatcatgttgcccatgatg
attttgccgattgtcagcgtgatgatgagcattgatacttccttgatggcagccgctcgc
agcatgggcgcaaagccgttcaccgcctttctccgggtcttcgtacctcttagtatcccg
ggcgttcgaagcggctgcatattggtttttgttgtttgcctgggcttttacatcacgcca
caagcattgggcggcttgggcgacaccatgctttcaaccctcatcaattcgcagcttaca
acatcgttgaacattgcggcgaccgccgcggcagcctttatattgttggcgatggcgctc
gcggttctttccgtagcgggcgtcaatctcgccggcgcgcatggacagcctgcttcaagc
gagcagaacgcccgacgacgtaaactgccttcattcgacaaggcatcccgctatctcaac
gagtttctcgtcccgtatcgggcgcgacgctgggcagcaaagctccatcaagcgcagcgg
gaaaccccgtggtccaagattgcgggggcagcattccttgccgtcgttgtcatctatcta
ttggcgcccggtttcatcgtgatcatcgtctcgttaaatgcaggggagttcctcgagttc
ccacctaaggctgtttcgctcagatggtactattcgttcttcaacgacccctcgtggatc
ggcgcattgtggaacagcttccaattcggcgtaattgtcagcgtggtatcgaccatagtc
ggcacattggcagcgtttggcctcagccggtgctcgtcgcgcttgcgctcgggtctaacc
atggtgatcctgacgccgattaccttcccaatcattgttgttggtgttgctgtctatacc
gggctggccaaactaggattggttggaacgaacaccgggatcatcctgggccagacgatc
ggagccatcggctatgtcgttgtcatcgtccttgcgacactcgcaggattcgacaggagg
ctggaacaggcggcaatgagcatgcgcgccgggccgacccagacgttcatgcgggttact
ctcccgttaatccgctctggtatcatcggcggcgcgctcttcgcgttcttggcttccttc
gacgaggtcatcatcacgtcgtttgtcagtggctatgcgatcccgacattgccattgaaa
atgctggaaaacctgaagcagcaacttgacccgacgatcgctgccgttggcgctttgctg
acaatgttgccaatcgtctggctggttgcgctttatttcacgctttggcgcggaagaggg
gcgttgaagagtgctccggtcgccgcgacctga
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