Rhizobium tropici: RTCIAT899_PC02335
Help
Entry
RTCIAT899_PC02335 CDS
T02432
Name
(GenBank) putative polyamine ABC transporter, substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rtr
Rhizobium tropici
Pathway
rtr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RTCIAT899_PC02335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PC02335
Transporters [BR:
rtr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RTCIAT899_PC02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AGB74270
LinkDB
All DBs
Position
pRtrCIAT899c:515707..516879
Genome browser
AA seq
390 aa
AA seq
DB search
MNKSNDFASSALRSNMQRRDMLKLMGAGAAALSFGGLAATQAMADDATVAFWATATLDIG
DKWQEFTRQSGVSPEFTDNGNDVGPVVARLAAGNANDLFDVGGFQGGAERELAKQGLIAP
WDVSKIPNFAGIWQWAKDIPTLTYEGKQYGIPTVVNADSIIYRPDKLGKVDSYGVIFDPK
LKGRVAMEDAWINSAIFTAIYLKEAENKPIKEPGNLTESELGLVMEFLIKHKKDGQFRTF
WNGWEQGVQLVANEEVDAMTGWEPIVYEGRKRGLQVEYAAPVEGYEGWGNNTVLLKGATE
RGKGDVAHKFVDGLLAGLYGCELGKARGYLVPTDNNLAYAKAHPDEYKADDVAKLADHVK
AKFSGKVYWQNCRPDNFQLYEEWWQKLRNA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagcaatgatttcgcctcctccgccttgaggagcaacatgcagcgccgtgac
atgctcaaactaatgggcgcaggtgcggctgcgctctcctttggtggattggctgccacg
caggccatggccgatgatgcaacggtagcattctgggctaccgccacgctcgatatcggc
gacaagtggcaggaatttacccggcagagcggcgtttcgcctgagttcaccgacaacggc
aatgatgtcggtccggtggtcgcacgtcttgccgccggcaatgccaacgatctctttgat
gtcggcggcttccaaggcggggccgaacgggaacttgccaagcagggcctgattgcccct
tgggacgtctccaagatcccgaatttcgcgggcatctggcaatgggccaaggatatcccg
accttgacctatgagggcaaacagtacggcatcccaacggtcgtcaatgccgactccatc
atctatcgccccgacaagctcggcaaggtcgatagctacggcgtcatcttcgatccgaag
ctcaagggccgggtcgcgatggaagatgcctggatcaacagcgccatctttacggccatc
tacctcaaggaagccgaaaacaagccgatcaaggagccgggcaacctgacggaatccgag
cttggcctcgtcatggagttcctgatcaagcacaagaaggatggtcagttccgcaccttc
tggaacggctgggaacagggcgtgcaactggtggcgaacgaggaagtcgacgccatgacc
ggctgggagccgatcgtctatgaaggccgcaagcgcggacttcaggtggagtatgcagct
cccgtcgaaggctacgaaggctggggcaacaatacggtgctgctcaagggtgccacggag
cgcggcaagggcgacgttgcccacaagttcgtcgatggcttgcttgccggtctctatggc
tgcgaactcggcaaggcgcgcggttatctcgtgccgaccgacaacaacctcgcctacgcg
aaggcccatccggacgaatacaaggccgacgatgtcgccaagctcgccgaccatgtgaag
gccaagttctccggaaaggtctactggcagaattgccggccggacaacttccagctctac
gaagagtggtggcagaagctgcgcaacgcatga
DBGET
integrated database retrieval system
