Rhizobium tropici: RTCIAT899_PC02795
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Entry
RTCIAT899_PC02795 CDS
T02432
Name
(GenBank) transcriptional regulator, AraC family
KO
K02099
AraC family transcriptional regulator, arabinose operon regulatory protein
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtr03000
]
RTCIAT899_PC02795
Transcription factors [BR:
rtr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RTCIAT899_PC02795
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AGB74362
LinkDB
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Position
pRtrCIAT899c:complement(601988..602737)
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AA seq
249 aa
AA seq
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MPIAHRFNHHTLILTLSGKGQLQVNEVSSSLHEGTIAWLDSSMLYSHRCEPRHSHWSYLW
VGFVGYGLDTLFDSLGVIGNPIFDTANTRDPEALFEVILREVDTGSFLADNRCFALLAQL
ISFLVSERAESSELSASVQRLQRVMELVRTDLTRPWTVGDLATAANLSQAQLFRRFRQKM
GTTPLDWLRHERVNAAKPLLVVTDEQISRIASRCGYPDPFHFARDFKKLVGVTPSEFRRQ
GQNVRPIGI
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgcccatcgcttcaaccatcacaccctgatccttactctcagcggaaaaggc
cagctgcaggtcaacgaggtttcgagctcgctgcatgaagggacgatcgcctggctcgat
tcctcgatgctctattcgcatcgctgcgagccgcgccattcgcactggtcctatctatgg
gtgggtttcgtcggatatgggctcgataccttgttcgacagtctcggcgtgatcggcaat
ccgatcttcgacacggccaacacccgcgatccggaggcgctgttcgaagtcatcctgcgg
gaagtggacacgggcagctttcttgctgacaacagatgctttgccctgctggcacagttg
atttcattccttgtatccgagcgtgccgaaagcagcgaactcagcgcctccgtacaacga
ttgcaacgggtcatggaactggttcgcaccgatctgacacgcccctggacagtaggagac
ctcgcgaccgccgccaatttaagccaggcgcaattgttccgccgctttcgccagaaaatg
ggaacgacgcctctcgattggctgcgccatgagcgtgtgaatgccgcaaagccgttgctg
gtcgtaacggatgagcagatcagccggatagcctcccgatgcggctatcccgaccccttt
cactttgcccgcgacttcaagaagctggtcggcgtcactcccagcgagttcaggcggcag
ggccagaacgtgcggccgatagggatatga
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