Rhizobium tropici: RTCIAT899_PC05635
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Entry
RTCIAT899_PC05635 CDS
T02432
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00300
Lysine biosynthesis
rtr00470
D-Amino acid metabolism
rtr01100
Metabolic pathways
rtr01110
Biosynthesis of secondary metabolites
rtr01120
Microbial metabolism in diverse environments
rtr01230
Biosynthesis of amino acids
Module
rtr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RTCIAT899_PC05635
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RTCIAT899_PC05635
Enzymes [BR:
rtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RTCIAT899_PC05635
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AGB74922
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Position
pRtrCIAT899c:complement(1196315..1197559)
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AA seq
414 aa
AA seq
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MTIPSNETLSALAADYGTPLWIYDAAAIRRRIAQLSAFDVIRYAQKACSNIHILKEMRKA
GVRVDAVSLGEIERAMRAGFSAGNASGEAEVVFTADVFDRPTLERVVADKIEVNIGSIDM
LRQLGERSPGHRVWLRINPGFGHGHSKKTNTGGETSKHGIWFEQLQEAVALTRQFSLKLV
GLHMHIGSGVDYGHLQRVCGAMIGFCRTLDVDIEAISAGGGLSVPYREGEEEIDPAHYFS
LWDKARREIETHVGHPIRLEIEPGRFLTADAGVLLAEVRAVKMMGRNRFVLVDAGFSDLA
RPAMYGSYHHIAVIPGTTPRSAAGTIFPTVVAGPLCESGDVFTQTDNGTVETRDLPETHV
GDYLVFHGAGAYGATMSSNYNSRLYAPEVLIDGETHRLIRRRQTLDELFMLEAI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcccttccaacgaaacgctgagcgcgcttgctgccgactatggaacgccgctc
tggatctatgatgctgccgcgatccgccgccgcatcgcccaactctccgccttcgacgtc
attcgctatgcgcagaaggcctgttcgaacatccatatcctgaaggagatgcgcaaggca
ggcgtgcgggtcgatgctgtctcgctcggcgagatcgagcgggcgatgcgtgcaggtttt
tccgccggcaatgcgtcgggagaagcggaggtcgtcttcaccgccgacgtcttcgatcgg
ccgacgctggaacgcgtcgttgccgacaagatcgaggtaaatatcggctccatcgacatg
ctgcgtcaattgggtgagcgctcaccgggccatagggtttggctgcgcatcaatcccggc
ttcgggcatggccatagcaaaaagaccaacaccggcggcgaaaccagcaagcatggcatc
tggttcgagcagttacaggaggcagtggcgctgacgcggcaattttcgctgaagctcgtc
gggttgcacatgcatatcggctccggtgtcgattatggacatctgcagcgtgtctgcggt
gcaatgatcggattctgccgcacgctggatgtcgatatcgaggccatttccgccggcggc
ggtctgtctgtgccttacagggagggtgaggaggagatcgatcctgcccattacttttcg
ctctgggacaaggcccggcgcgagatcgagacgcatgtcggccatccgatccggcttgag
atcgagccgggccgcttcctgacagcggatgcaggcgtattgctggcagaagtgagggcg
gtcaagatgatgggccgcaaccgcttcgtgcttgtcgatgccggcttcagcgatctcgcc
cggccggcgatgtatggcagttaccatcacatcgcggtcattccgggcacgacgcctcgc
agtgctgccggaacaatcttcccgacagtcgtcgcaggccccctctgcgaatcgggcgat
gttttcacgcaaacggacaatggcacggtggaaacccgcgatctgcccgaaacccatgtc
ggcgactatctcgtgtttcatggtgccggcgcttacggcgcaaccatgtcatcgaactat
aacagccgtctttatgcaccggaggtcctgatcgacggcgagacccatcgcttgatccgc
cgccgccagacactcgatgagctgttcatgctggaagcgatctag
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