KEGG   Rhizobium tropici: RTCIAT899_PC09200
Entry
RTCIAT899_PC09200 CDS       T02432                                 
Name
(GenBank) ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
rtr  Rhizobium tropici
Pathway
rtr00330  Arginine and proline metabolism
rtr00480  Glutathione metabolism
rtr01100  Metabolic pathways
rtr01110  Biosynthesis of secondary metabolites
rtr04148  Efferocytosis
Module
rtr_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    RTCIAT899_PC09200
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    RTCIAT899_PC09200
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    RTCIAT899_PC09200
Enzymes [BR:rtr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     RTCIAT899_PC09200
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase NUP50
Other DBs
NCBI-ProteinID: AGB75627
LinkDB
Position
pRtrCIAT899c:1977666..1980023
AA seq 785 aa
MDYFRRFNFLFATPTFDNEDLEGARYIQIVEEIERSGFEVVRARNLEDAEIAVQTDAAIG
CMLVDWGKKGLEGKTASLINLMRRRGLEFPIILLIRRKRFEDVPVEVLDFIDGYVFLSEE
TPAFIAKSLISRLKQYAETLKTPFFGALVDYAEEGNHLWTCPGHNGGIFYSRSPIGRVFM
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALAAQKEAAKIFGAEKTYFVLNGTSTSNKVAL
SALVTDGDLVLFDRNNHKAAHHGALMISGGIPLYLPTARNLYGLIGPMDFATMDEDALRE
RIRTHPLVKDPEAYKKPRPFRVAVVEQCTYDGTIHNAEMILKRIGHLCDYILFDEAWAGF
MKFHPLYAGRFAMGLSDLGPDAPGIIATQSTHKQLASFSQASQIHMKDRHITGQKRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAVRREF
EEKEHRPERRWFFEPFVPDRVAIPDVSSPGAVHDVPWESVATDQLATNPSFWHLTPDEAW
HGFSGMEPGFAMTDPNKLTLLTPGFDRATGKYTEHGIPAPVVAQYLRENRIVAEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKKLHDDNALLEEAIPEFYRRRPGRYAGVRLRDLCAE
MHNFFRQADVSALQTKQFSAEHLPPIAMSPHDAARCLVRNDVDYLPIDAIAGRIATTPFV
VYPPGIATIVPGERLTEQAKPMIDYLKMFETCFNTFPGFEVEIQGLYREVDAAGKIRLYT
YVVAE
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggattatttcagacgtttcaactttctgttcgcgacgccaacctttgacaatgaggat
ctggagggtgcccgctacattcagatcgtcgaggagatcgaacgctccggtttcgaggtg
gtgcgcgcgcgcaatctcgaagacgccgagatcgccgtgcagacggacgctgccatcggc
tgcatgctggtcgactggggcaagaagggcttggaaggcaagactgcttccctcatcaac
ctcatgcgccggcggggcctcgaattccccattatcctactgatccgccgcaagcgcttc
gaggatgtgccggtcgaagtcctcgatttcatcgacggctatgtcttcctgtccgaggaa
acgcccgctttcatcgcaaagagcctcatcagccggctcaagcaatatgccgagacgctg
aagacgcctttcttcggtgcgcttgtcgattatgccgaggagggcaaccacctctggacc
tgccccgggcacaatggcggcatcttctatagccgcagtcctatcggccgtgtcttcatg
gagcatctcggcgaagcggtgtttcgcgacgacctcgacaattccgtgctcgatctcggc
gatcttctgacccatgaagggccggcgcttgccgcgcagaaggaagcagccaagatcttt
ggcgccgagaagacctatttcgtcctcaacggcacgtccacgtcaaacaaggtcgctctg
tcggccctcgtcaccgatggcgatctggtgctgttcgaccgcaacaaccacaaggccgcc
catcacggtgcgctgatgatctcgggcggcattccgctctatctgccgaccgcacgcaat
ctttatggcctgatcggtccgatggactttgcaacgatggacgaggacgcgctgcgcgag
cgcatccgcacccatccgctggtgaaagatccggaggcctacaagaagccgcgcccgttc
cgcgtcgcggtcgtggagcaatgcacctatgacggcaccatccacaatgccgagatgatc
ctcaagcgcatcggccatctgtgcgactacatcctcttcgatgaggcctgggcgggcttc
atgaagtttcatccgctttatgccgggcgctttgccatgggtctttccgacctcggcccg
gatgcgcctggcatcatcgccacccaatccacccataagcagctcgcaagcttctcgcag
gcctcgcagatccacatgaaggataggcacatcaccggccagaagcgccgcgtggagcac
cggcgcttcaacgaaagcttcatgcagcacgcttcgacctcgcccttctatccgctgttt
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctcgggcgaagtgctttgggac
gacacgatccgtctcggcatcgagctgcgcaagaaaatccgtgccgtgcgccgcgaattc
gaggagaaggagcatcgcccggaacgacgctggttcttcgagcctttcgtgccggatcgg
gtggcgattccggatgtgtcgagcccaggcgccgtgcatgacgtgccgtgggaaagcgtg
gcgaccgaccagctcgccaccaatccctccttctggcacctgacgcccgatgaggcatgg
cacggcttttccggcatggaaccgggctttgccatgaccgacccgaacaagcttaccctg
ctcactccgggcttcgaccgagccaccggtaaatacaccgagcatgggattccggcgccg
gtggtcgcgcaatatctgcgcgaaaaccgtatcgtcgccgaaaagaacgacctgaattcg
ctgctcttcctcctcacccccggtgtcgaagccagtaaggccggtacgttgatcagcggc
cttgtcgccttcaaaaagcttcatgacgacaatgcgctgctggaagaggcaatcccggaa
ttctatcgccgccgtccaggccgctatgcaggcgtgcgcctgcgcgatctctgcgctgaa
atgcacaatttcttccgccaggccgatgtgagcgccctgcagacgaagcagttttccgcc
gaacacctgccgccgatcgccatgtcgccgcacgatgccgcacgttgccttgttcgcaac
gatgtcgactatctgccgatcgacgccattgccggccgcatcgcaacgacacccttcgtc
gtctatcctccgggtatcgcgaccatcgtgccgggcgagcgcctgacggaacaggcaaag
cccatgatcgactatctcaagatgttcgaaacctgcttcaacaccttccccggtttcgag
gtggagatacaaggcctctatcgcgaggttgatgcagccggcaaaatccggctctatacc
tacgtcgtcgcggaatag

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