Rhizobium tropici: RTCIAT899_PC09560
Help
Entry
RTCIAT899_PC09560 CDS
T02432
Name
(GenBank) secretion protein HlyD
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PC09560
Transporters [BR:
rtr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RTCIAT899_PC09560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_AAEA
BSH_CusB
Beta-barrel_RND_2
HH_YBHG
Biotin_lipoyl
Beta-barrel_YknX
HH_MFP_RND
BSH_YknX
Beta-barrel_AprE
BSH_CzcB
DUF4945
HH_EMRA
DUF5451
Motif
Other DBs
NCBI-ProteinID:
AGB75698
LinkDB
All DBs
Position
pRtrCIAT899c:2055231..2056457
Genome browser
AA seq
408 aa
AA seq
DB search
MVELPRNEAFKNASQADAAPVNEVAKSPAADVPQGRVAEAPIGDARPKADRKLIKRGLLI
AALLAGVAAAADFGYRYWTVGRFIESTDDAYVKADYTTIAPKVAGYIKEVLVNDNDHVKA
GQLLARIDDRDFQAALSQAKADLKAADAAIANIDAQIQLQQSLIGQAKATVDASQASLDY
AVSDAARSARLITNGVGTQSRAEETESARRQAAAAVERDQAALVAAQTKVPVLQTQRDQA
AAQRDRAAAAVQQAELNLSYTNIVAAVGGTVGARSIRVGQYVTAGTQLMAVVPLHSVYVV
ANFKETQLTYVRPGQSVEIKVDSFPDVTIKGHVDSLSPASGLEFSLLPPDNATGNFTKIV
QRIPVKIVIDDDNLAGLLRSGMSVEPEIDTKAAQTSAAGAQGSSSHAG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaactaccgcgcaacgaggcgttcaagaacgcaagccaggccgatgctgctcca
gtcaacgaggttgcgaaatctcccgccgccgacgttccgcaaggaagagttgccgaagcg
cctatcggtgacgccagaccaaaggcggataggaagctcatcaagcgcggcttgctgatc
gccgcgctgctggccggcgtcgcggccgcagcggatttcggctatcgctactggacggtc
ggacgcttcatcgaatccaccgacgatgcctatgtgaaggccgattacaccacgattgcc
ccaaaggtcgccggctacatcaaggaggtgcttgtcaacgacaatgaccatgtcaaggcc
ggccagcttcttgcccgcatcgatgaccgcgatttccaggcggcgctttcccaagcaaaa
gccgatttaaaggctgcggatgcagcgatcgccaatatcgatgcgcagatccagctgcag
caatcgctgatcgggcaagccaaggcaacggtcgacgcgtcgcaagcctctctggattat
gctgtatcggatgccgcccgttcggctcgtctgattaccaacggcgtcggcacacagtcg
cgcgctgaagagacagaatcggccagaaggcaggcagcggccgctgtcgagcgcgaccag
gccgcgctcgtcgcagctcaaaccaaagttcccgtgctgcagacccagcgagaccaggca
gctgcccagcgcgatcgcgccgctgcggccgtccagcaggccgagctcaatctttcctat
accaacatcgtcgcagccgtcggcggcacggtcggtgcccgctctatccgcgtgggacaa
tatgtgacggcaggtacgcagctgatggcggtggttccgctgcattcggtctatgtcgtt
gcgaatttcaaagaaacgcagctgacctatgtacgccccggccaatccgtcgagatcaag
gtcgacagcttccctgacgtcaccatcaagggccatgtcgacagcctctcgccggcaagc
gggctcgaattctcgctgttgccgcctgacaacgccaccggcaacttcaccaagatcgtc
cagcgcataccggttaagatcgtcatcgacgacgataatctcgccggattgctgcgctcg
ggcatgtcggtggagccggaaatcgataccaaggctgcccagacatcggcagccggcgca
cagggatcatccagccacgctggatga
DBGET
integrated database retrieval system
