Rhizobium tropici: RTCIAT899_PC09560
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Entry
RTCIAT899_PC09560 CDS
T02432
Name
(GenBank) secretion protein HlyD
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_PC09560
Transporters [BR:
rtr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RTCIAT899_PC09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
Biotin_lipoyl
HlyD_2
DUF4945
DUF5451
Motif
Other DBs
NCBI-ProteinID:
AGB75698
LinkDB
All DBs
Position
pRtrCIAT899c:2055231..2056457
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AA seq
408 aa
AA seq
DB search
MVELPRNEAFKNASQADAAPVNEVAKSPAADVPQGRVAEAPIGDARPKADRKLIKRGLLI
AALLAGVAAAADFGYRYWTVGRFIESTDDAYVKADYTTIAPKVAGYIKEVLVNDNDHVKA
GQLLARIDDRDFQAALSQAKADLKAADAAIANIDAQIQLQQSLIGQAKATVDASQASLDY
AVSDAARSARLITNGVGTQSRAEETESARRQAAAAVERDQAALVAAQTKVPVLQTQRDQA
AAQRDRAAAAVQQAELNLSYTNIVAAVGGTVGARSIRVGQYVTAGTQLMAVVPLHSVYVV
ANFKETQLTYVRPGQSVEIKVDSFPDVTIKGHVDSLSPASGLEFSLLPPDNATGNFTKIV
QRIPVKIVIDDDNLAGLLRSGMSVEPEIDTKAAQTSAAGAQGSSSHAG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaactaccgcgcaacgaggcgttcaagaacgcaagccaggccgatgctgctcca
gtcaacgaggttgcgaaatctcccgccgccgacgttccgcaaggaagagttgccgaagcg
cctatcggtgacgccagaccaaaggcggataggaagctcatcaagcgcggcttgctgatc
gccgcgctgctggccggcgtcgcggccgcagcggatttcggctatcgctactggacggtc
ggacgcttcatcgaatccaccgacgatgcctatgtgaaggccgattacaccacgattgcc
ccaaaggtcgccggctacatcaaggaggtgcttgtcaacgacaatgaccatgtcaaggcc
ggccagcttcttgcccgcatcgatgaccgcgatttccaggcggcgctttcccaagcaaaa
gccgatttaaaggctgcggatgcagcgatcgccaatatcgatgcgcagatccagctgcag
caatcgctgatcgggcaagccaaggcaacggtcgacgcgtcgcaagcctctctggattat
gctgtatcggatgccgcccgttcggctcgtctgattaccaacggcgtcggcacacagtcg
cgcgctgaagagacagaatcggccagaaggcaggcagcggccgctgtcgagcgcgaccag
gccgcgctcgtcgcagctcaaaccaaagttcccgtgctgcagacccagcgagaccaggca
gctgcccagcgcgatcgcgccgctgcggccgtccagcaggccgagctcaatctttcctat
accaacatcgtcgcagccgtcggcggcacggtcggtgcccgctctatccgcgtgggacaa
tatgtgacggcaggtacgcagctgatggcggtggttccgctgcattcggtctatgtcgtt
gcgaatttcaaagaaacgcagctgacctatgtacgccccggccaatccgtcgagatcaag
gtcgacagcttccctgacgtcaccatcaagggccatgtcgacagcctctcgccggcaagc
gggctcgaattctcgctgttgccgcctgacaacgccaccggcaacttcaccaagatcgtc
cagcgcataccggttaagatcgtcatcgacgacgataatctcgccggattgctgcgctcg
ggcatgtcggtggagccggaaatcgataccaaggctgcccagacatcggcagccggcgca
cagggatcatccagccacgctggatga
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