Raoultibacter timonensis: CE91St31_06360
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Entry
CE91St31_06360 CDS
T08072
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rts
Raoultibacter timonensis
Pathway
rts03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rts00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CE91St31_06360 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rts03021
]
CE91St31_06360 (rpoA)
03400 DNA repair and recombination proteins [BR:
rts03400
]
CE91St31_06360 (rpoA)
Enzymes [BR:
rts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CE91St31_06360 (rpoA)
Transcription machinery [BR:
rts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CE91St31_06360 (rpoA)
DNA repair and recombination proteins [BR:
rts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CE91St31_06360 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
RNA_pol_L_2
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BDF49906
LinkDB
All DBs
Position
792791..793741
Genome browser
AA seq
316 aa
AA seq
DB search
MTEFMRPTVTTEEINETVARFVVEPLERGYGYTLGNCMRRVLLSSLDGAKATAIQIEGVQ
HEFTTAEGVIEDITDIVLNVKGLVFSALSDDIEEATAHVLAEGPCTVTGADLDIPTEFTL
INPEHVIATVADGGQLDMTIRIGVGRGYVSAERNKRTEDPIGVIHVDSLFSPVRRCTLNV
TDTRVGQRTDYDKLVLEVETDGSIAPTEAICRAANIINQYMGAFLSLSDTLEEEEGEVAS
IFAPEGQESNAELDKQIEDLDLSVRSYNCLKRAGIHSVRQLVEFSENDLLNIRNFGAKSI
EEVKDKLISMDLNLKL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttcatgaggccgacggtaacaacggaagagatcaacgagaccgttgctcgt
ttcgttgtcgagccgcttgagcgtggttacggttacacattgggtaactgcatgcgtcga
gtgctcctttcctcgctggacggtgcgaaagcaaccgcgatccagatcgagggggtgcaa
cacgagttcaccaccgctgaaggcgtgatcgaagatattaccgacatcgtgctgaatgtg
aaaggcctggtgttttccgcactttccgatgacatcgaagaggcgactgctcacgtattg
gctgaaggaccgtgtacggtcaccggtgcggatctcgatatccccaccgaattcacgctg
atcaaccccgagcacgtcatcgctacggttgccgacggcggtcagctcgatatgaccatc
cgcatcggcgtcggccgcggctacgtttcggctgagcgcaacaagcgcaccgaagatcct
atcggcgtcatccatgtcgactcgctgttctcgccggttcgtcgttgcacgttgaacgtc
accgatacccgcgtgggccagcgcaccgactacgacaagttggtgctggaggttgagacc
gacggctccatcgcccccaccgaggcgatctgccgtgcggccaacatcatcaaccagtat
atgggcgcgttcttgagcctctccgatacgctcgaagaagaggaaggcgaggttgcctcg
atcttcgctcccgaaggccaggagagcaacgcggagctcgacaagcagatcgaggatctg
gacctctcggttcgctcctacaactgcctgaagcgtgcgggtatccactccgtgcgccag
ctcgtcgagttctccgagaacgaccttttgaatatcaggaactttggtgcgaaatccatc
gaagaggtcaaagacaagctgatctcgatggatctcaatttgaagctatag
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