Raoultibacter timonensis: CE91St31_16940
Help
Entry
CE91St31_16940 CDS
T08072
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rts
Raoultibacter timonensis
Pathway
rts03420
Nucleotide excision repair
rts03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CE91St31_16940
03430 Mismatch repair
CE91St31_16940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rts03400
]
CE91St31_16940
Enzymes [BR:
rts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CE91St31_16940
DNA repair and recombination proteins [BR:
rts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE91St31_16940
MMR (mismatch excision repair)
Other MMR factors
CE91St31_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
Viral_helicase1
AAA_19
DEAD
AAA_16
AAA_30
SLFN-g3_helicase
NACHT
DUF892
nSTAND3
DUF3760
Motif
Other DBs
NCBI-ProteinID:
BDF50964
LinkDB
All DBs
Position
2041710..2043782
Genome browser
AA seq
690 aa
AA seq
DB search
MDTTTGADPDPKTPDVFAEEEEHLGATLEKLAQAIDHASELFEQTNDAYRSTKFYMSENR
GEIDPQEMYQNELYLKEVDRNAEIAHLSRERLVQLYDSPYFANVTFRVDGEDDAKTSYIG
RFAFSHEGSIEISDWRSPVAGLFYDFDRGRAEYAAPSGLMAGTLTGKRQIKVEDSALVYA
VEDDSGIRDEVMQRELSRTSDKKMRSIISSIQREQNQIIRDETGGTLVIQGVAGSGKTSI
ALHRIAYLLYRRKGTLSSNSVAILSPNKVFGDYIANVLPELGEEPVREMDVRTVAETMLG
SNLSIAPQRYPVDEIDSAWLKRASFKGTVEFAESIASYAQRFRDEALRGVDLGFGSNTFS
GSWLTERYRSYGRLTVKERIDLLASEIVAEMSSRSIGRRVEVPKKNEVRQKLNAMLAAKD
ALSLYRLFMAEAGSKSLFTMPAKGTVEWEDACAIAYLQSAFGGFEELAEVKHLLIDEMQD
LTPMQHLLIARLFPCEKTILGDFNQTVDPTNAMTLEAMADMYGKPEVFHLRESYRSTLEI
NELAQRVKPVADPVFMERHGDEVRTERCGNAQGVLTKLTELIDAFEQSEFKTLGIIHKSD
KVARVYYELLAGSHRVHLLSDESATFSDGVSIASVKMSKGLEFDEVIVLDADDSQYGSDY
ERSLLYVAVTRAMHRLTILYRDKPTPLLGL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggacacgacgaccggagccgaccccgacccgaaaacccccgatgtattcgctgaagaa
gaggagcatctcggcgcaacgctcgagaaactcgcccaggcgatcgatcacgcctcggag
ctgttcgagcaaaccaacgacgcctaccgttcaaccaaattctacatgtccgagaacagg
ggagagatcgaccctcaggagatgtaccaaaacgagctctacctcaaagaggtcgaccgc
aacgccgagatcgcccacctttcccgagagcgcctcgtgcagctctacgattcgccgtac
ttcgccaacgtgacgtttcgcgtagacggggaagacgatgcgaagaccagctatatcggc
aggttcgccttcagccacgagggaagcatcgaaatatcggattggaggagcccggtcgcg
gggcttttctacgatttcgacaggggacgggcggaatacgccgcgccttcggggctcatg
gcaggtacgcttacgggcaagcggcagatcaaggtcgaagacagcgcgctcgtctacgcg
gtcgaggatgactcgggtattcgcgacgaagtgatgcagcgggagctcagccgcacatcg
gacaagaagatgcgttcgatcatttcgtcgatccagcgcgaacagaaccagatcatccgc
gacgaaaccggcggcaccctcgtcatccaaggcgttgcaggctcggggaaaacctccata
gcgcttcatcgcatcgcctacctgctctatcggcgcaaaggcacgctcagttcgaattct
gtcgccatcctgtcgccgaacaaggtgttcggcgactacatcgcaaacgtcttacccgag
ctcggcgaggagcccgtacgcgagatggacgtacgcaccgtcgccgaaacgatgctcgga
tcgaacctgagcatcgcgcctcagcgctatccggttgacgaaatcgactccgcatggctc
aagcgagcctccttcaagggaaccgtcgagttcgccgaatcgattgcgtcgtatgcgcaa
cgttttcgcgatgaggcccttcgtggagtcgacctcggcttcgggtcgaacacgttttcg
ggctcgtggctgaccgagcgataccgcagctacggcaggctcacggtcaaagagcgcatc
gatcttctggcgtcggagatcgtcgccgagatgtcgtcgcgctcgatcggcaggagagtc
gaggttcccaagaagaacgaggttcgccaaaaactcaacgccatgctcgccgccaaggat
gctttgagcctgtatcgcctcttcatggccgaagccgggagcaagagccttttcacaatg
ccggcaaagggtaccgtggaatgggaggatgcctgcgcgatcgcgtacctgcaatcggcg
ttcggcggcttcgaggaacttgccgaagtaaagcacctgctcatcgacgagatgcaggat
ctgactccgatgcagcacctgctcatcgcgcgcctgtttccctgcgagaagacgattctc
ggcgatttcaaccagacggtcgatccgacgaacgccatgacgctcgaggcgatggcggat
atgtacgggaagcccgaagtgttccatcttcgggaaagctatcggtcgacccttgagatc
aacgagctcgctcaacgggtgaagcccgtcgcggatccggttttcatggaacggcacggc
gacgaggttcgtaccgagcggtgcggaaacgcccaaggcgtgctcacaaaactcaccgag
ctcatcgacgcgttcgagcaaagcgaattcaagacgctcggaatcatccataaatcggac
aaggtggcgcgagtgtactacgagttgctggcggggtcgcatcgcgttcacctcctatcc
gacgaaagcgcgaccttctcggacggcgtctcgatcgcttccgtgaagatgtcgaagggc
cttgaattcgacgaggtgatcgtcctcgatgccgacgattcgcagtacggaagcgattac
gagcgcagcttgctgtacgtagccgtcacgcgcgctatgcaccggctcacgatcctgtac
cgcgataaaccgactccgcttctcggactgtaa
DBGET
integrated database retrieval system
