Raoultibacter timonensis: CE91St31_17330
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Entry
CE91St31_17330 CDS
T08072
Symbol
pnp_1
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rts
Raoultibacter timonensis
Pathway
rts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St31_17330 (pnp_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rts03019
]
CE91St31_17330 (pnp_1)
03016 Transfer RNA biogenesis [BR:
rts03016
]
CE91St31_17330 (pnp_1)
Enzymes [BR:
rts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CE91St31_17330 (pnp_1)
Messenger RNA biogenesis [BR:
rts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CE91St31_17330 (pnp_1)
Transfer RNA biogenesis [BR:
rts03016
]
Prokaryotic type
tRNA degradation factors
CE91St31_17330 (pnp_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
FlgM
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
BDF51003
LinkDB
All DBs
Position
complement(2088359..2090587)
Genome browser
AA seq
742 aa
AA seq
DB search
MEKIVESFELYGKSYRLETGELAKQATGAVLVTQGDTTVLVTAVVGKEKPDYDFFPLTVD
FIEKMYAVGRIPGGYLKREARPSDKGTLTARMIDRPIRPGFPDGYKYEVHVVATTLVVDS
VNPPDCICVAGASAALMVGGAPFDGPAACVRIARDIETGEFIVNPTFEEQEHSDLELTIA
GTADYISMVEAGADEISEEDMLAAMTFGQEAIAAFCEKQAAFIAKANPEPMSYNVHEADP
SIAARIEPFLDQMSAALKDADKHARMDKVAELKASIKENEFSEEECAAWGSDIAAELKKL
EKHAMRAMVIETGERADGRTPEEIRPLHIVPGYLPRVHGSGLFQRGQTQALSICTLGMLN
EWQRLDTIDPAEGKRYMHQYNFPPYSTGETGRMGAPKRREIGHGALAERALIPVLPDEDE
FPYAIRVVSEVLESNGSSSMASTCGSTLALMDAGVPIKRPVSGIAMGLIKEGDDVVILSD
IQGIEDFLGDMDFKVCGTEIGITSLQMDNKAKGLSVDILARALAQAKDGRAFILSAMLDE
IAEPREELRDTAPRIETIHIPVDKIRDIIGTGGKVIRGIQDETGATIEVQEDGTVHIAAV
EGPAGEAAKAIILGIVKEPEVGEVYDGEVVGIKDFGAFVKLTPGKDGLLHISRMANGRVA
KVEDVLALGDIVKVEVIEVGDNGKISLDRVDKPDAPASSGNSDKGDNRPGRGDRKERSDR
GNGGSSGKSEGGNNGRTPRRRH
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattgtcgaatccttcgaactgtacggcaagtcgtaccgactcgaaaccggc
gagctcgccaagcaggctaccggtgccgtgctggtcacccagggcgataccaccgttttg
gtcaccgctgtggtgggcaaggaaaagcccgattacgacttcttcccgctgacggtcgac
ttcatcgagaagatgtacgccgtcggccgcattcccggcggctatctcaagcgcgaggcc
cgtccttccgacaagggcacgctgaccgcgcgcatgatcgaccgtcccatccgccccgga
ttccccgacgggtacaagtacgaagtccacgtcgtggccacgacgcttgtcgttgacagc
gtcaacccgcccgattgcatctgcgttgccggcgcgtccgcggcgctcatggtcggtggc
gcaccgttcgacggccctgcggcttgcgtgcgcatcgcccgcgatatagaaacgggcgag
ttcatcgtgaacccgacgttcgaggagcaggagcattccgatctcgagctcaccattgcc
ggcacggccgattacatctccatggtcgaagccggcgccgacgagatatccgaagaggat
atgcttgcggccatgacgttcggtcaggaggccatcgcagcgttctgcgagaagcaggct
gcgttcatcgccaaggcgaaccccgagcccatgtcctacaacgtgcatgaggcagatccc
tctatcgcggcgcgcatcgagccgttcctcgatcagatgtcggcggcgctcaaagatgcc
gacaagcatgcccgcatggacaaagtcgccgagctcaaggcttccatcaaggagaacgaa
ttctccgaagaggagtgcgctgcctggggaagcgacatcgccgccgagctcaagaagctc
gagaagcacgcgatgcgcgccatggtcatcgagacgggcgagcgcgccgacggtcgcaca
cccgaagagatccgcccgctgcacatcgttcccggctacctgccccgcgttcacggctcc
ggcctgttccagcgcggtcagacccaggcgctctccatctgcacgctcggcatgctcaac
gaatggcagcgtctcgatacgatcgatcctgctgagggcaagcgctacatgcatcagtac
aatttcccgccgtactccaccggcgagaccggccgcatgggcgccccgaagcgccgcgaa
atcggccacggagcgcttgcggagcgcgcgctcattccggtgcttccggacgaagacgag
ttcccctacgccatccgtgtggtttctgaggtgctcgagtccaacggctcctcttcgatg
gcttctacctgcggctcgacgcttgccctgatggatgcgggcgtgccgatcaagcgcccg
gtttcgggcatcgccatgggcctcatcaaggaaggcgacgacgttgtcatcctttccgac
atccagggcatcgaggacttcctcggcgacatggacttcaaggtgtgcggcactgagatc
ggcatcacgtcgcttcagatggataacaaggcgaagggcctctcggtcgatatcctcgcc
cgtgcgctcgctcaagccaaggacggccgtgccttcatcctgtcggccatgctcgacgag
atcgcagagccgcgcgaagagctgcgcgacaccgcgccgcgcatcgagaccatccatatc
ccggtcgacaagatccgcgatatcatcggcaccggcggcaaggtcatccgcggcattcag
gacgagaccggcgcaacgatcgaggttcaggaagacggcaccgtgcatatcgccgccgtc
gagggtcctgcaggcgaagccgctaaggccatcatcctcggtatcgtgaaagagcccgag
gtgggcgaggtttacgacggcgaagtcgtcggcatcaaagacttcggcgcattcgtgaag
ctgacgcccggcaaagacggcctgcttcacatttcgcgtatggccaacggacgcgtcgcc
aaggtcgaggacgtgctggctcttggcgatatcgtgaaggtcgaggtcatcgaagtgggc
gacaacggcaagatctcgctcgatcgcgtcgataagcccgatgcccccgcatcttccggc
aacagcgacaagggcgacaaccgtccgggtcgcggcgatcgcaaggagcgcagcgaccgc
ggtaacggcgggagctccggtaagagcgaaggcggcaacaacggccgcacgccgcgccgc
cgccactag
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integrated database retrieval system
