Raoultibacter timonensis: CE91St31_18280
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Entry
CE91St31_18280 CDS
T08072
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rts
Raoultibacter timonensis
Brite
KEGG Orthology (KO) [BR:
rts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rts03000
]
CE91St31_18280
Transcription factors [BR:
rts03000
]
Prokaryotic type
Helix-turn-helix
Other families
CE91St31_18280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
IstB_IS21
PAS
AAA_16
MCM
PAS_4
PAS_8
bpMoxR
PAS_9
HTH_7
DUF815
HTH_17
AAA_7
TIP49
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BDF51098
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Position
2193651..2195837
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AA seq
728 aa
AA seq
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MDNAAGTVDSDYVEDLQLIRSIREDDSFWDCIFEAKLDFLNNDADPFQASCVRPEIADSW
VRSYNSGLKPDDSDLGEHITEDELQRVLAENAEIADTARSLIKNVESLNLQNDYIFELLD
ASGIALVQIGNLDQHQFVGPLYRCDEGNVGTNAHTLCMRYKKPFVVVGPEHYCFALQGLI
ACAAPVIDQSDTSIAALTLTQSIPEGPLSPSDEKVLVHAMSLVSSLAIALSDQLRINQQE
VKLAETEQKYSQASLEAQRFESISRTVINAVKDGVLICNAEGSITLATPEAAHLLKIPPE
DLMGTNARSLVGDGRSFEEIVEQGGSTTVIIDEELHETKISQIFGSKSELEGFIISLKEA
KRTTLGASRGKVGDTADILFKDILGESTQINKAKALASRFARSTENILLMGESGTGKELF
AQAIHNQACPNGPFMSINCAAIPPRLIESELFGYESGSFTGAEKGGKPGKIELAEGGTLF
LDEIGDMPLELQATLLRVLENKRVIRVGGKTYKQIDFRLIAATNQNLPKLVSEHRFREDL
LYRISVLTVNLPPLRDRIGDALYFARFFLNECQIRTGNGRVTLSDEAAHFVSVYAWPGNV
RQLKHAIYSAYYTCENGVINIDDFPLYIAQNLNHRAPAEHLGSEPSGALTQNESSSSVKV
QDGCAPASNTASEPFCVAQDSPLPTLSLSDLERIAINEAIRQADGNIAAAAAILDISKAT
LYRKLKDS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgccgcaggtaccgtggactctgattacgtggaagacctccaactcatcaga
tccattcgagaagacgattcattttgggactgcatcttcgaggccaagctcgacttcctc
aacaacgatgccgaccccttccaagcaagctgcgtgcgacccgaaatagccgactcgtgg
gttcgttcgtacaacagcgggctcaagcccgacgactccgacctcggggagcacatcacc
gaggatgagcttcagcgcgttctcgccgaaaacgccgagatagcggatactgctcgctcg
ctcatcaagaacgtcgaatcgctgaacctgcagaacgattacattttcgaactgctcgac
gcaagcggcatagcgctcgtccagatcgggaacctcgaccagcatcagttcgtcggcccg
ctctaccgctgcgacgaagggaacgtgggaacgaacgcgcataccctgtgcatgcgctac
aagaaaccgttcgtcgtcgtgggacccgagcactactgcttcgccctgcagggcctcata
gcctgcgccgcaccggttatcgaccagtccgatacgagcatcgcagcgctcacgctcacg
caatccataccggagggtccgctttcgccatccgacgaaaaggttctcgtccatgccatg
agcctcgtgtcgtcgctcgccatcgccctgagcgaccagctgcgcatcaaccagcaagag
gtcaagctcgccgaaaccgagcagaagtacagccaggcctcccttgaagcccagcggttc
gagagcatctcgcgcaccgtcatcaacgcggtgaaggacggcgttttgatctgcaacgcc
gaaggatcgataacgcttgccacccccgaagccgcgcacctgctcaagataccgcccgag
gatctgatgggaaccaacgcacgctcgctcgtgggcgacggacgctccttcgaagagata
gtcgaacagggcggttcgacgacggtcatcatcgacgaggagctccacgaaaccaagatc
tcgcagatattcggcagtaagagcgaactcgaaggcttcatcatatcgctcaaggaagcc
aagcgtacgacgctcggagcctcgcgcggcaaagtcggcgacaccgccgacatcctattc
aaagatatactcggggaaagcacccagatcaacaaggcgaaagccctcgcctcgcgattc
gcccgatcgaccgagaacatccttctcatgggcgagagcggcacgggtaaagagttgttc
gcccaggccattcacaatcaagcatgcccgaacggccccttcatgtcgatcaactgcgcg
gccattcccccccgcctcatagaaagcgagctgttcggctacgagagcggaagttttacg
ggtgccgagaagggcggcaagccaggcaagatagagcttgccgagggcggcacgcttttc
ttggacgaaataggcgacatgcccctcgaactccaggccacgctgctgcgcgtcctggag
aacaagcgcgtcatccgcgtcggcgggaaaacgtacaagcagatagatttccgcctgata
gccgcaacgaaccagaaccttccgaagctcgtgagcgagcaccggtttcgcgaagacctg
ctctaccgcatatcggtgctcaccgtcaatctccccccgctgcgcgaccgaatcggcgac
gcgctctacttcgcgcggttcttcctcaacgaatgccagatcagaaccggaaacggcagg
gtcacgctctccgacgaggccgcgcatttcgtcagcgtctacgcatggccgggaaacgtt
cgccagctcaaacacgctatctattccgcgtactacacctgcgagaacggcgtgatcaac
atagacgatttccccttgtacatcgcgcagaacctcaatcaccgcgccccagcggaacat
ctcggctccgaaccttccggggccttgacccaaaatgaatcgtcttcttctgtcaaggta
caggacggctgcgctcccgcatcgaacaccgcgagcgaaccgttctgcgtcgcgcaggat
tcacctttgccgacgctttccctcagcgacctcgagcgcatcgccatcaacgaggcgatc
aggcaggctgacggcaacatcgccgcagctgcagccatcctcgacatcagcaaggcgacg
ctctaccgtaagctcaaagactcgtaa
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