Rickettsia typhi TH1527: RTTH1527_02010
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Entry
RTTH1527_02010 CDS
T01802
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rtt
Rickettsia typhi TH1527
Brite
KEGG Orthology (KO) [BR:
rtt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtt03016
]
RTTH1527_02010
Enzymes [BR:
rtt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RTTH1527_02010
Transfer RNA biogenesis [BR:
rtt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RTTH1527_02010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFE54267
LinkDB
All DBs
Position
complement(521398..522009)
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AA seq
203 aa
AA seq
DB search
MNIKIYQNDLPNNFKLEGDIAVDTETMGLNIHRDKLCLLQFSNGNGAAHLVHFINQDYTA
PNLKALLLDKTRCKIFHFARFDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLC
RELLNINISKQQQSSYWGTDNLSLEQKEYAAKDVLYLHQLKDILQKMLFRENRLELAHEI
FRFLPTRVNLDLIGWDQIDIFTH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaaatttatcaaaacgacttacctaataattttaaacttgaaggagatatc
gcggtagataccgaaacgatgggattaaatatacatagagataaactatgtttacttcaa
tttagtaacggtaacggtgcagctcatcttgttcattttataaatcaagattatactgct
cctaatcttaaagcgctattgttagataaaactagatgcaagatatttcattttgctaga
tttgatttagcatctataaaaaaatatttaagtatagatttagaaaatatcttttgtact
aaaatttcctcaaaattagttagaacctacactgatagccatggtcttaaagatttatgc
agagaattgcttaatataaatatttcaaaacaacaacaatcttcctattggggtactgac
aatttatctttagaacaaaaagaatatgcagcaaaagatgtactttatttgcatcaatta
aaagatattttacaaaaaatgctatttagagaaaatagacttgaacttgcacatgagatt
tttcgttttttaccaacaagagttaatttagaccttataggttgggatcaaatcgatatc
ttcacgcattaa
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