Rickettsia typhi TH1527: RTTH1527_02385
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Entry
RTTH1527_02385 CDS
T01802
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rtt
Rickettsia typhi TH1527
Pathway
rtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RTTH1527_02385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtt03019
]
RTTH1527_02385
03016 Transfer RNA biogenesis [BR:
rtt03016
]
RTTH1527_02385
Enzymes [BR:
rtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RTTH1527_02385
Messenger RNA biogenesis [BR:
rtt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RTTH1527_02385
Transfer RNA biogenesis [BR:
rtt03016
]
Prokaryotic type
tRNA degradation factors
RTTH1527_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFE54342
LinkDB
All DBs
Position
624548..626785
Genome browser
AA seq
745 aa
AA seq
DB search
MFNEITKSVIWNRQVLEISTGKIARQADAAVTVKMGNSILLCTCVVANKVKDGIGFFPLT
INYREMAYSAGKIPGGFLKREGKASDKEILVSRLIDRPIRPLFHQAFIHETHITCSVLSY
DPETPVDILAIIGASAALSISPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTKDSVMMVESEAHLLSEEKMLEAIKFGFENFQTVIKLIKEFAKEAKKPKFEMQDLYPSS
LKKEIGKLFAKEIEQAFAIKSKQERNANLALIHEKVLTHFVCDIENKKYNNYQIESTLKA
ISADILRNKILEQNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLIKEGDKFAILS
DIIGDEDYFGDMDFKVAGTSKGITALQMDIKISGIDFKIIQVALEQARHGRLHILEQMNK
IISKPNSELSKNAPSSTTIKIDKDKIKDIIGPGGKIIKEICETSNAKIDISDDGTVSVYA
ADRDKIKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISETRI
DKVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNACKDHSLNNPKQKNNVKEDSEPEQRRDA
SKKRTWNEDNNTEMSEVITERKYFT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaaataactaagagcgtgatatggaataggcaagtgcttgagattagtaca
ggtaaaatagcaagacaagctgatgcagcagttactgtaaaaatgggtaattcaatttta
ttatgtacgtgtgtagtagcgaacaaagtgaaagatggtataggatttttccctttaaca
attaattatagagaaatggcatattctgctggtaagataccaggggggtttttaaaacgt
gaagggaaagcatcagataaagaaattttagtatctcgtttaatagatagaccaattaga
ccattatttcatcaagcttttatacatgaaacgcatataacttgcagtgttctttcatat
gatcctgaaactcctgtagatatacttgcaattataggtgcatctgctgcacttagcata
tcccctgccccttatctagaaatagttgctgcaagtaaagtaggtttaattaatggtgaa
tttgttttaaatcctacacttgaattattaaaaacaagtcagcttgatttagtagtagca
ggaacaaaagattcagtgatgatggttgaatcagaagcacatttactctctgaagaaaaa
atgttagaagcaataaaatttggatttgaaaatttccagacagtcatcaagctaattaaa
gaattcgcgaaagaagctaaaaagcctaaattcgaaatgcaagatttatatccttcttca
ttaaagaaagaaattgggaaattatttgcaaaagaaattgaacaagcttttgcgataaaa
tctaagcaggaacgtaatgctaatttagctttaatacatgaaaaagttcttacacatttt
gtatgcgatatagaaaataaaaaatataataattatcaaattgaatcaactttaaaagct
atttcagcagatatattacgtaataaaattttagaacaaaatatacgtattgatggaaga
agcacaacagatataagacaaattgcttgtgaagtaggtttattaccatcagcacacgga
tcagctttatttactagaggtgaaacgcaaagtttagttagtactacatttgggactagt
ttagatgagcaaatagttgacagtttagaaggtgaatataaagaacgttttatgctaaat
tatatattcccgccctattctgtcaatgaagcaatgccaatgaaagctcctagtcgtcgt
gaagttggacacggtaaacttgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgctgaaactactgagtctaacggttcttcttcg
atggcaactgtttgcggtagttctcttgctttaatgtatgctggcgtgccaataaaagca
ccggttgctggtattgctatgggtcttattaaggaaggtgataaatttgctatattatcg
gatattatcggtgatgaagattatttcggtgatatggattttaaagttgcaggcactagt
aaagggattactgcattacaaatggatattaaaatatcaggaatagattttaaaataatc
caagtagctttagagcaagcacgacacggtcgtttgcatatactggagcaaatgaataaa
attatcagtaaaccaaatagtgaactaagtaaaaacgccccttcttctactactataaaa
atagacaaagataaaattaaagatattatagggccaggtggtaaaataataaaggaaatt
tgtgaaactagtaatgcgaaaatagatataagcgatgacggcacggtttctgtttatgct
gcagatagggataagataaaagttgcattggataaaattaaagcgattgctgttgagcct
gaaattggtgaaatatttaacggtacggtaatgaaagttttagattctggtgcttttatt
aattatttagggaataaagacggctttgttcatattagtgaaatttcagaaacaagaata
gacaaggttagcagtgttttaaaacaaggtgatatagtaaaagttaagctaataggcttt
gataataaaggtaaagcaaaactaactattaaaaatgcttgcaaagatcactctttaaat
aatccaaaacaaaaaaataatgttaaagaagattcagaacctgagcagcgacgtgatgct
agtaaaaaacgtacttggaatgaagataataatactgaaatgtctgaagtaattacagaa
cgtaaatattttacataa
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