Rickettsia typhi TH1527: RTTH1527_03020
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Entry
RTTH1527_03020 CDS
T01802
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rtt
Rickettsia typhi TH1527
Pathway
rtt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rtt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RTTH1527_03020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtt03021
]
RTTH1527_03020
03400 DNA repair and recombination proteins [BR:
rtt03400
]
RTTH1527_03020
Enzymes [BR:
rtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RTTH1527_03020
Transcription machinery [BR:
rtt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RTTH1527_03020
DNA repair and recombination proteins [BR:
rtt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RTTH1527_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
AFE54469
LinkDB
All DBs
Position
complement(815467..816489)
Genome browser
AA seq
340 aa
AA seq
DB search
MLSLSKNWNTLIKPNRVTYENFPETNNKAKIIVEPLERGFGLTLGNAMRRVLLSSLQGAA
ITSIKIPAIEHEFSSIPGVQEDVSEVILNIKGIEVKMHVSEKRIMKLKATGPCVVTAGMI
DTGHDVEILNPNHVICNLAKNKQLEMELTCKVGKGYVLSTNSYEDNLPIGEIAIDALFNP
VKSVTYKVENTRVGQVTDYDKLIIFVETNGDVLPEMAVGLAARILQEQLQLFIAFEEQEE
DKQVKTDSLPFSPYLLKRVDELELSVRSANCLKNDNIIYIGDLVKRTESDMLRTPNFGRK
SLNEIKEILAKFNLRFGMDVPDWPPENIQELSKRYEDSYN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttatcattaagtaaaaattggaatactttaattaagccgaatagagtcacgtatgaa
aatttccctgaaacaaataataaagctaaaattatagttgagcctttagaaagaggtttt
ggtttaactcttggtaatgctatgagaagagtattactatcttctttacaaggagctgct
attacttctataaagattcctgctatagagcacgaattttcttctatacctggtgtacaa
gaagatgtatcagaagtgattttaaacattaagggtattgaagtaaaaatgcatgtttcg
gaaaaacgtatcatgaaattaaaagcaacaggaccttgtgttgtaacagcaggtatgatt
gatacagggcatgatgtagaaatactgaatccaaatcatgtaatttgtaatttagctaag
aataagcagcttgaaatggaattaacatgtaaagttggtaaagggtatgtacttagcaca
aatagctatgaggataacttacctattggtgaaatcgctatagatgctttatttaaccca
gtaaagagtgttacttataaggttgaaaatactagggttggtcaagttactgactatgat
aagttaattatatttgtagaaactaatggtgatgtattacctgaaatggctgtagggtta
gcggctcgtattttacaagagcaattacaattatttattgcttttgaagagcaagaagaa
gataagcaagtaaaaactgattctttaccattttcgccatatttacttaagagagttgat
gaattggaattatcagtgagatctgcaaattgtttaaagaatgataatataatatatata
ggagatctagtaaaaagaacggaatctgatatgttgagaactccaaattttggtagaaaa
tctttaaatgagattaaagaaatattggcaaagtttaatttaaggttcggtatggatgtg
ccagattggccaccggaaaatattcaagaattatctaaacgttatgaagattcttataat
taa
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