Rhizobium tumorigenes: PR017_00080
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Entry
PR017_00080 CDS
T08990
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtu03032
]
PR017_00080
03036 Chromosome and associated proteins [BR:
rtu03036
]
PR017_00080
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_00080
DNA replication proteins [BR:
rtu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PR017_00080
Chromosome and associated proteins [BR:
rtu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PR017_00080
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PR017_00080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
WFR95593
UniProt:
A0AAF1K4A8
LinkDB
All DBs
Position
14192..14497
Genome browser
AA seq
101 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAGGNRVELRGFGAFSVKNRPSRS
GRNPRTGDTVFVEEKWVPFFKTGKELRERLNPDSHDEDDDS
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaatcggaattggtgcagatcgttgcggcgcgaaatccgcatctttatcaccgt
gacgtcgagaatatcgtcaatgcggtcctcgacgagatcacggatgccctggctggcggt
aaccgggtcgagctgcgcggtttcggtgctttttcggttaaaaaccgcccttcgcgctcc
ggtcgcaacccgcgcaccggcgatactgtcttcgtcgaggagaaatgggtaccgttcttc
aagacaggtaaagagctccgcgagcgcctcaatcctgacagccatgacgaagacgacgac
agctga
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