Rhizobium tumorigenes: PR017_01015
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Entry
PR017_01015 CDS
T08990
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03420
Nucleotide excision repair
rtu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PR017_01015
03430 Mismatch repair
PR017_01015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_01015
Enzymes [BR:
rtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PR017_01015
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PR017_01015
MMR (mismatch excision repair)
Other MMR factors
PR017_01015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
HHH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WFR95763
UniProt:
A0AAF1KGG3
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All DBs
Position
complement(201046..203115)
Genome browser
AA seq
689 aa
AA seq
DB search
MNAAYLEKLNPEQRLAVEHGTDIDGSHVSGPLLVIAGAGSGKTNTLAHRVAHLIVKGADP
RRILLMTFSRRAAAEMGRRVEKICAQVLGPKAGIMTDALAWSGTFHGIGARLLRDYAEQI
GLDPAFTIHDREDSADLMNLIRHDLGFSKTENRFPTKGTCLAIYSRAVNSETPLDQVLRD
VFPWCATWENQLRELFASYVEAKQVQNVLDYDDLLLYWAHMVHEPLIAEDIGNRFDHVMV
DEYQDTNRLQSSILMALKPGGQGLTVVGDDAQSIYSFRAATVRNILDFPASFSPAARIVT
LDRNYRSTQPILAAANAVIDLASERFTKNLRTERTSAQRPKLVTVRDEADQARYIADMVL
ENRESGTILKQQAVLFRASHHSGPLEIELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFA
QNPRDRVAGFRLMQLLPGVGPSTAQKVLDRMDDEASPITALTEIPAPPRSGDDWTSFVET
LQAVKSGKAGWPAEIGLVREWYAPHLERLHEDAATRQADLLQLEQIASGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTKVFMLNVIDGCIPSDLGVGTSAEI
EEERRLLYVAMTRAKDNLDLVLPQRFFVHGQNAQGDRHVYANRTRFIPATLLQFFEVCGW
PTARSDSPAAQQARQIRVDVGARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcctatctggaaaaactcaatcccgagcagcggctggccgtcgagcacggc
accgatatcgacggaagccatgtttcaggccccctgctagtgatcgccggcgccggctcc
ggaaagaccaacacgctcgcccaccgcgttgcccacctgatcgtcaagggcgccgatccg
cgccgtatcctgctgatgaccttctcgcgccgggctgctgccgagatgggccgccgcgtc
gagaagatctgcgcccaggtgctcggcccgaaagccggaatcatgacggatgcactggcc
tggagcgggacattccacggcatcggcgcgcgcctgctgcgcgattatgccgaacagatc
ggcctcgacccggcgtttacgatccacgaccgcgaagacagcgccgacctgatgaacctg
atcaggcatgacctcggtttttcaaagaccgagaaccgctttccgaccaaaggcacctgc
cttgccatctattcgcgcgcggtcaattccgagacgccgctggaccaggttctgcgcgat
gtcttcccatggtgcgccacctgggaaaaccagctgcgggaactctttgccagctatgtc
gaggcgaagcaggtgcagaacgtcctcgattacgacgacctgctgctctactgggcgcat
atggtgcatgagccgctgatcgccgaagacattggcaaccggttcgaccatgtcatggtc
gacgaataccaggacaccaaccggctgcaatcgtccatcctgatggcgctgaagcctggc
ggacagggccttacggttgtcggcgacgacgcccagtcgatctactccttccgcgcggcg
acggtacgcaacatcctcgatttccctgcatcgttttcgccagccgcccgtatcgtcacg
ctcgaccgcaactaccgctcgacgcagccgatccttgccgccgccaacgccgtcatcgat
ctcgcctcggagcgctttaccaaaaatctgcgcaccgagcggacgtcggcacagcgtccg
aagctggtgaccgtccgtgacgaggccgatcaggcccgctacatcgccgacatggtgctc
gagaaccgcgagagcgggacaattctcaaacagcaggcggttctcttccgggcctcgcac
cactccggcccgctggagatcgaactgacgcggcgcaacattccattcgtcaagttcggc
ggcctgaaattcctcgacagcgcccacgtgaaggatatgctggccgccctgcgctttgcc
cagaacccacgcgaccgcgtggccggtttccgactgatgcagcttctgcccggtgtcgga
ccgtcgacagcgcaaaaagtgctcgaccggatggacgacgaggcgagcccgattaccgcg
ctgaccgaaatccccgccccgcctcgcagcggcgatgactggaccagttttgtcgagacc
ttgcaggcggtgaaatcgggcaaggccggctggccggccgagatcggcctggtgcgggaa
tggtatgcgccacatctggagcgcttgcacgaggatgccgcgacacgacaggcggatctt
ctgcagctcgaacagatcgcttcgggctatccctcgcgggaacgttttctaaccgaactt
acgctcgacccgccggatgcgacgagcgaccaggccggcgtgccgctactcgacgaggat
tatctcatcctctcgaccatccattccgccaagggccaggaatggaccaaggtattcatg
ctgaacgtcatcgacggctgcattccctcggatctcggcgtcggcacatcagccgagatc
gaggaggagcgtcggctgctctacgtggcgatgacccgcgccaaggacaatctcgacctg
gtcctgccgcaacgcttcttcgtccacggccagaacgcccagggcgaccgtcacgtctat
gccaaccgtacccgcttcatacccgcgaccctgctgcagttcttcgaagtctgcggctgg
cccaccgcccgctcagactcacccgccgcccagcaggcaaggcagatccgggtagatgtc
ggcgcgcgtatgcgggggatgtggcggtag
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