Rhizobium tumorigenes: PR017_04465
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Entry
PR017_04465 CDS
T08990
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00190
Oxidative phosphorylation
rtu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PR017_04465
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PR017_04465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtu03019
]
PR017_04465
Enzymes [BR:
rtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
PR017_04465
Messenger RNA biogenesis [BR:
rtu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PR017_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Carot_N
Motif
Other DBs
NCBI-ProteinID:
WFR96393
UniProt:
A0AAF1KHC5
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All DBs
Position
905129..907330
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AA seq
733 aa
AA seq
DB search
MESSVAELPEEGEPEIVAKPPISDLMNSPERFINREFSWLQFNRRVLEETLNTAHPLLER
VRFLSISAANLDEFFMVRVAGLEGQVRQNIVVRSPDGKTPAEQLNDILREIDNLQMEQQA
SLAVLQQYLAKEDILIVRAAALSEADRQWLANEFDQSIFPVLTPLSIDPAHPFPFIPNLG
FSIALQLNSMRGHEAMTALLRLPPALDRFIRLPDANGVIRYITLEDVVNIFIHRLYPGYE
VQGSGTFRLIRDSDIEVEEEAEDLVRFFETALKRRRRGSVIRIETDSEMPAPLRHFVVTA
LSVPDNRVAVLPGLLALNTLSEITKAPREDLRYQPYNARFPERVREHAGDCFAAIREKDM
VVHHPYESFDVVVQFLIQAARDPDVLAIKQTLYRTSNDSPIVRALIDAAEMGKSVTALVE
LKARFDEEANIRWARDLERAGVQVVFGFIELKTHSKMSLVVRREEGRLRSYCHLGTGNYH
PITAKIYTDLSYFTCNPKIAHDMANIFNFITGYGEPAESMEIAVSPYTLRSRILKHIEQE
IVHAGEGRPAAIWMKMNSLVDPEIIDALYRASYAGVEIDLVIRGICCLRPQVAGLSDNIR
VKSIVGRFLEHSRIFCFGNGHRLPSDKALVYIGSADMMQRNLDRRVETLVPLLNPTVHEQ
VLSQIMLGNLIDNQQSYEILPDGTSRRMEVRKGKEPFNAQQYFMTNPSLSGRGEALKSSA
PKLIAGLLSRRKS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcagtcgcagaacttccggaggaaggcgaaccggagatcgttgcgaagccg
ccgatcagcgatctgatgaacagtccggaacgcttcatcaaccgcgagttttcgtggctg
cagttcaatcggcgcgtcctagaagagaccttgaacaccgcccatccgctgctcgaacgc
gtgcgcttcctgtcgatctcggccgccaacctcgacgagttcttcatggtccgcgtcgca
ggcctcgaaggccaggtgcgccagaacatcgtcgtgcgcagtcctgatggcaagactccg
gccgagcagctgaacgacatcctgagggagatcgacaacctgcagatggagcagcaggcc
tcgctcgccgtcctgcagcagtaccttgccaaggaagacattctcatcgtccgtgcggct
gcgctgtccgaggctgaccgccagtggctcgccaacgaattcgaccagtcgatctttccc
gtgctgacgcccctgtcgatcgacccggcccatccctttccgtttatccccaatctaggc
ttttccatcgccctgcagctgaacagcatgcgcggccatgaagcgatgacggcgctgctg
cgcctgccgccggcgctcgatcgctttatccgtctgccggacgctaatggcgtcattcgc
tacatcacgcttgaggacgtggtgaacatcttcatccatcgtctctatccgggttacgag
gtacagggatccggcaccttccggcttatccgtgacagcgacatcgaggttgaggaagag
gccgaagacctggtgcggttcttcgagacggcgctgaagcgtcgccgtcgcggttcggtc
atccgcatcgagaccgattccgaaatgcctgccccgctacgacacttcgtcgtgacggcg
ctcagtgtgccggacaatcgtgttgccgtgctgcccggtctgctggcgctgaacacgctg
tccgaaatcaccaaggcgccgcgtgaagacctgcgctaccagccttacaatgcccgcttc
ccggagcgcgtgcgcgagcatgcgggcgactgttttgctgccatccgcgagaaggacatg
gtggtccaccatccttacgaatccttcgacgtcgtcgtccagttcctgatccaggcggcg
cgcgacccggacgtgctggcgatcaagcagacgctgtaccgaacctccaacgacagccct
atcgttcgcgccctgatcgacgctgcggaaatgggcaagtcggtgactgcgttggtcgaa
ctcaaggctcgtttcgatgaagaggccaatatccgctgggcgcgcgacctcgagcgcgcc
ggcgtgcaggtcgtcttcggcttcattgaattgaagacccactctaagatgtccctggtc
gtccgtcgcgaggagggcaggctgcgcagctactgccatctcggcaccggcaactaccac
ccgatcaccgccaagatctataccgacctttcctacttcacctgcaacccgaagatcgcc
cacgacatggcgaacatcttcaatttcatcaccggttatggcgagccggccgagagcatg
gagatcgcggtttcgccctatacgctgcgctcgcgtatcctcaagcacatcgagcaggaa
atcgttcacgcaggcgaggggcgtcctgccgcgatctggatgaagatgaattcgctggtc
gaccccgagatcatcgatgcgctctatcgcgccagctatgcaggcgtcgagatcgacctc
gtcattcgcggcatctgctgcctcaggccgcaggtggccgggctttccgacaatatccgc
gtcaagtcgatcgtcggccgcttcctcgagcacagccgcatcttctgcttcggcaacggt
catcgcctgccatcggacaaggctctggtctacatcggatctgccgatatgatgcagcga
aatctcgaccggcgcgtcgaaacgctggtgccacttcttaaccctacagtacacgagcag
gttttgtcgcagatcatgctcggcaacctgattgacaaccagcagagctacgagatattg
cccgacggtacctccaggcgcatggaagtgcgcaaggggaaagagccgttcaacgcgcag
cagtatttcatgaccaatccgagcctgtccgggcgcggcgaggccctgaagtccagtgcg
ccgaaactcattgccggcctgttgtcgcgccggaagtcatag
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