Rhizobium tumorigenes: PR017_05985
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Entry
PR017_05985 CDS
T08990
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_05985
Enzymes [BR:
rtu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PR017_05985
DNA repair and recombination proteins [BR:
rtu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PR017_05985
Prokaryotic type
PR017_05985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WFR96672
UniProt:
A0AAF1KRF1
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All DBs
Position
complement(1191139..1192596)
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AA seq
485 aa
AA seq
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MTAVTKASGCTILWFRKDLRLDDNLALHAACEKGRPIFPLYIREPDKDGTGPLGAAQRWW
LHHSLTALQVSLRELGSDLMLASGEALSVLTKLIETSGATGVVWNRRYDPAGIAVDTEIK
RQLAERSIEATSFAGQLMHEPSKLMTGGGTPYRVYTPFWRALEGRGEPPEPLDAPKKITA
PEAWPDSEPLSDWKLLPTKPNWALSFSDVWVPGEASARARLDDFVDEALTGYKADRDFPA
KPATSMLSPHLALGEISPARIWYATRNLPKSTPQDDVIHFRKELAWRDFSYHLLFHFPAL
PSANWNKRFDAFEWRTETDLFEDWTQGRTGYPIVDAGMRQLWKHGWMHNRVRMIVASFLI
KDLLIDWRQGEEWFRDTLVDADPASNAASWQWVAGSGADASPFFRIFNPILQGEKFDPEG
TYVREFVPELAELGNKYIHRPFEAPASVLDQAGIALGKTYPNPIVDHAKARDRALKAYSA
VKDAA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagtgacgaaggcgagcggatgtaccatcctttggttcagaaaggacctccgg
ctcgacgacaacctcgcgctgcatgccgcctgcgaaaaaggccggccgatctttcccctt
tacatacgcgaacccgataaagacggcacgggaccgctcggcgccgcacagcgctggtgg
ctccatcactcgctgactgcgctgcaggtgtcccttcgcgaacttggcagcgacttgatg
cttgcaagcggcgaggcgctttcggtgctcacaaagctgatagaaacctcaggcgcgacc
ggcgtggtctggaaccgccgctacgaccctgccggtatcgccgtcgacaccgagatcaag
cggcaactcgccgagcgcagcatagaggccaccagctttgcaggtcagctgatgcatgag
ccttcgaagctgatgaccggcgggggcacaccctaccgcgtctacacgccgttctggcgg
gcgctcgaaggccgtggcgagccgccggagccgctggatgcaccgaagaaaatcacagcc
cctgaagcgtggccggacagcgagccattgtcggactggaagctgctgccgacaaagccg
aactgggcgctctcgttctccgacgtctgggtgccaggcgaagcgtcggcgcgcgcgcgg
ctcgacgacttcgtcgacgaggcgctgactggttacaaggcggatcgtgatttcccggcc
aagcccgcgacctcgatgctgtctccgcatttggcactcggcgagatatcgccagcccgc
atctggtatgcgacgcgcaacctgccgaagagcacgccgcaggacgacgtcatccatttc
cgcaaggaactggcctggcgcgatttctcctatcatctcctgttccacttcccggccctt
ccctccgccaattggaacaagcgtttcgacgccttcgaatggaggacggaaacggatctg
ttcgaggactggacgcaagggcgtacaggctacccgattgtcgatgccgggatgcggcag
ttgtggaagcatggctggatgcacaatcgcgtccgcatgatcgtcgcttcgttcctgatc
aaggatctgctgatcgactggcgtcagggcgaggagtggtttcgcgacacgctcgtcgac
gccgatcccgccagcaatgctgctagctggcagtgggtcgcagggtccggggccgacgcc
tcgccgttcttccgtattttcaaccccattctgcagggcgagaaattcgatcccgagggg
acttatgtccgcgagttcgttccggaactggccgaactcggcaacaagtacattcaccgg
ccgttcgaggcaccggcatcggtgctcgaccaggcgggcatcgctctcggcaagacctac
cccaacccgatcgtcgaccacgcaaaggcccgtgaccgggcgctgaaagcctatagtgca
gtaaaggacgccgcatga
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