KEGG   Arminella tumorigenes: PR017_06340
Entry
PR017_06340       CDS       T08990                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rtu  Arminella tumorigenes
Pathway
rtu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rtu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PR017_06340
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rtu02022]
    PR017_06340
Two-component system [BR:rtu02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   PR017_06340
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA AAA_2 AAA_16 AAA_22 P-loop_TraG FleQ ABC_tran
Other DBs
NCBI-ProteinID: WFR96736
UniProt: A0AAF1KAQ0
LinkDB
Position
1266477..1267841
AA seq 454 aa
MASDILVVDDEEDIREIVSGILSDEGHETRTAHDSDSALATIAERVPRLIFLDIWMQGSK
LDGLALLDEIKIRHPDLPVVMISGHGNVETAVSAIKRGAFDFIEKPFKADRLILIAERAL
ENSKLKKEVVDLKRRTGDTIELIGTSVAVSQLRQTIDKVAPTNSRVMIFGPSGSGKELVA
RMVHKKSTRANGPFVALNAANITPDRMEVALFGTEGSPGQARKIGALEEAHRGMLYLDEV
GEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLESRIAENLFREDLYHRL
AVVPVRVPALAERREDIPFLVDQLMRQISEQAGIRQRRIGDDAMAVLQAHDWPGNIRQLR
NNIERLMILARTDGPDTPITAEMLPTDLGDMLPKVSAQNDYHIMTLPLREAREMFERDYL
IAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcatctgatattctggtggtagacgacgaggaagacattcgcgagattgtttccggc
attctctccgacgagggccacgagacccgcacggcgcatgacagcgacagtgcgcttgcg
accatcgccgagcgcgtgccgcgcctgatatttctcgatatctggatgcaggggagcaag
ctcgacgggctggcgctgctggacgagatcaagatccgtcacccggatctgccggtggtg
atgatctcgggtcatggcaacgtcgagaccgccgtttccgccatcaagcgcggcgccttc
gactttatcgagaagccgttcaaggcggaccgccttatcctgatcgccgagcgggcgctc
gaaaactccaagctcaagaaggaagttgtcgacctgaagcggcgcaccggcgacacgatc
gagttgatcggtacctcggtcgctgtgtcgcagttgcgccagaccatcgacaaggtggcg
ccgaccaacagccgcgtcatgatcttcggcccgtccggctccggcaaggaacttgtcgcg
cgcatggtgcacaagaaatcgacccgtgccaacggcccgttcgtcgccctcaacgcggcc
aatattaccccggaccgcatggaagtggcgctgttcggcaccgaagggtcgcccgggcag
gcgcgcaagatcggcgccctcgaggaagcccatcgcggcatgctctatctggacgaagtc
ggcgaaatgccgcgcgagacgcagaataagatcctgcgggttctggtcgatcagcagttc
gagcgcgtcggcggctccaaacgcgtcaaggtcgatgtccgtatcatttcgtcaacggcc
tacaatctcgaaagccggattgccgaaaacctgttccgcgaggacctctatcaccggctc
gccgtggtgcccgtccgcgttccggcgcttgccgagcggcgcgaggacattccgttcctc
gtagaccagctgatgcggcagatctccgagcaggccggtatccgccaacgccgcatcggc
gacgacgccatggcggtgctgcaggcccatgactggccaggcaatattcgccagctgcgc
aacaacatcgagcggctgatgattctcgcccgcaccgacggaccggacacgccgatcacc
gcagagatgctgccgaccgatctcggcgatatgctgccgaaggtgtcggcgcagaacgac
tatcacatcatgacgttgccactgcgcgaggcccgcgaaatgttcgaacgcgattacctg
atcgcccagatcaaccgtttcggcggcaacatctcgcggactgccgagtttgtcggcatg
gagcgatctgcgctgcatcgcaagctgaagtctctgggcgtgtga

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