Rhizobium tumorigenes: PR017_07725
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Entry
PR017_07725 CDS
T08990
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00520
Amino sugar and nucleotide sugar metabolism
rtu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PR017_07725
Enzymes [BR:
rtu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
PR017_07725
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Glyco_hydro_32N
Motif
Other DBs
NCBI-ProteinID:
WFR96987
UniProt:
A0AAF1KRQ9
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All DBs
Position
complement(1550018..1551625)
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AA seq
535 aa
AA seq
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MIHNPILPGFNPDPSICRVGADYYIATSTFEWYPGVQIHHSRDLVNWTLVRRPLERQAQL
DMRGNPDSCGIWAPCLSHADGLFWLVYTDVKRLDGNFKDAHNYIVTSETIEGEWSDPVHV
NSSGFDPSLFHDADGRKWFVNMQWNHRSESFGGSPKSPAFDGILLQEYDAASKSLKGPIR
NIFAGSPLGLVEGPHLFQRNGWYYLTTAEGGTGYDHAVTMARSRDIGGPYELHPDSHLMT
AKGHPDAALQRTGHGQYVETPDGEAYHTHLCGRPLAPLRRCTLGRETALQKCVWKDDWLY
LANGTVVGDVDVQGLAGAVPLDKPRRSGANFDGPTLPADFQWLRTPRPERLFSLTERPGH
LRLFGRESIGSWFEQSLVARRQEHHSFRAETVIEFAPDTYQQVAGLTHYYNRFKFHALAV
TVHEELGRCLTILSCPGDYPEGRLTFPIGSGVAVPEGRLQLSLEVRDNDLQFYWQAEGMG
AWQAIGPVLDAGVISDEGGRGEHGSFTGAFVGMFAFDLSGRAKAADFDWFNYDIL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaatcctattttgcccggctttaatcccgacccgtctatctgccgcgtcggt
gccgactactatatcgcgacatcgaccttcgagtggtatccgggtgtgcagatccaccac
tcgcgcgacctggtgaactggacgttggtgcgccggccgctcgagcgacaggctcagctc
gacatgcgcggcaatccggacagctgcggcatctgggcgccatgcctgtcccatgccgat
gggcttttctggctggtctataccgacgtcaaacggctcgacggcaatttcaaggacgct
cataattacatcgtgacctcagagaccatcgagggcgaatggtcggatccggtccatgtc
aattcatcgggcttcgacccgtcgctgtttcacgatgccgacggtcgcaagtggttcgtc
aacatgcagtggaaccaccgcagcgagagctttggcggctcgccgaaatcgccggccttc
gacggtatcctgctgcaggaatacgatgctgccagcaagtcgctcaaagggccgatccgc
aacatctttgccggcagcccgctcggtctcgtcgagggtccgcatctgttccagcgcaac
ggctggtattatctgacgaccgccgagggtggcaccggctacgaccatgccgtcaccatg
gcccggtcgcgcgatatcggcggcccgtatgaactgcatccggacagccacctgatgacc
gcgaagggtcacccggatgctgcgctccagcgcaccgggcatggccaatatgtggagacc
cctgacggcgaggcctatcacacccatctctgtggccgtccgctggcgccgttgcgtcgc
tgcacgctcggtcgcgagacggccctgcagaaatgcgtctggaaagatgactggctctat
ctcgcaaacggcaccgtggtgggcgacgtggacgtacagggcctcgccggtgctgttccc
ctcgacaagccgcgacgcagcggtgcgaatttcgatggaccgacattgccggccgatttc
cagtggcttcgcacgccacggccggagcggctgttcagcctcaccgagcggccgggccat
ctgcggctgttcggccgcgaaagcatcggctcatggttcgagcagtcgctggttgcccgt
cggcaggagcatcacagcttcagggcggaaaccgtgatcgagtttgcgccggatacctac
cagcaggtagcggggctgacccattattataaccgcttcaagttccatgcgctcgccgtc
accgtgcatgaagaactcgggaggtgcctgaccattctctcatgcccgggcgactatccg
gagggacgtcttaccttccccatcggcagtggcgtcgccgttccagagggacgattgcag
ctctcgctggaggtgcgcgataacgacctgcagttctactggcaggccgagggcatgggt
gcatggcaggcgatcgggccggtgctcgacgctggcgtgatctcggacgagggcgggcga
ggcgagcacggctcgttcaccggcgcctttgtcggcatgtttgccttcgatctctctggt
cgggcgaaagccgcagatttcgactggttcaactacgacatcctctag
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