Rhizobium tumorigenes: PR017_07880
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Entry
PR017_07880 CDS
T08990
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rtu
Rhizobium tumorigenes
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtu01002
]
PR017_07880
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtu01011
]
PR017_07880
Peptidases and inhibitors [BR:
rtu01002
]
Cysteine peptidases
Family C82
PR017_07880
Peptidoglycan biosynthesis and degradation proteins [BR:
rtu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PR017_07880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
DUF4955
Motif
Other DBs
NCBI-ProteinID:
WFR97229
UniProt:
A0AAF1K773
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All DBs
Position
complement(1586229..1588046)
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AA seq
605 aa
AA seq
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MTLMDFIRGGKGRSQQQVDSNQILPPSMPIAPVPREGAGSGGPAPKVSSPTYYTYKPEPM
RLVATSKFADPVVTGAVADVSAAPVAVDPSSAQRRYLTEARVTATNDVARALEDYYADSK
KPMVWVADNAVSEKAKAAMAVLAQADLIGLDPDDYKVAVPVIDEGSVNPADRDRALTQFE
LALSAKVLAFVQDNQRGRIDPNKLSGYHDFKRKDVNLMPVLGNLSLSPDVTAYLNSRSPQ
NPQFDALKAEYARLKGESANDANRVAITLTGIIKPGDTSPQIANIVKGIQLKGSDALTTS
HADVFSSYQQTPLYTPELVSLVEAFQKEKGLTADGVIGQSTVRAIVGENSDAKLQKLTIA
MEQLRWLPDQLGPRYVFINQPAFMVYYYNDNKEALSMRVVVGAKGHQTNFFENQIQTVEF
NPYWGVPQSIIVNEMLPKLRADPNYLDKTGYQVEVNGRAVPSSSVDWYGSTTNIAVRQPP
SSDNALGELKILFPNSHAIYMHDTPSKSFFKKDMRALSHGCVRLADPRAMAAAVLNTTVA
DVAKQISTGENKAVPVPQRFPVYIAYFTAWPDKDGVVRYFDDVYDRDSYTKKAFATTTKV
REAQI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgatggattttattcgcggcggcaagggtcggtcgcagcagcaggttgacagc
aaccagatcctgccaccgagcatgccgattgctccggtgccgagagaaggtgcaggtagc
ggcggtccggctcccaaggtctcctcgccgacctactacacctacaagcccgagccgatg
cgcctggttgccaccagcaaattcgcagatccggtcgtcaccggtgccgtcgcagatgtg
tctgctgctcctgtcgccgtcgacccgtccagcgcccagcgtcgctacctcacagaagcc
cgggtgacggcgaccaacgacgtcgccagggctctggaagactattacgccgacagcaag
aagccgatggtctgggttgccgataacgcggtgtccgagaaggccaaggccgccatggcc
gtgctggcgcaggccgatctcatcggtctcgatcccgacgactacaaggttgccgttccc
gtcatcgacgagggcagcgtcaatcctgccgaccgtgaccgggccctgacacagtttgaa
ctggcgctgtctgccaaggtgcttgccttcgtgcaggacaaccagcgcggccgcatcgac
ccgaacaagctctccggctatcacgacttcaagcgcaaggacgtcaacctgatgcccgtg
ctgggcaacctgtcgctcagccctgacgtcaccgcctatctcaacagtcgcagcccgcag
aacccgcagtttgatgcgctgaaggccgaatatgcacggttgaagggggagagcgccaac
gatgccaaccgcgtggccattaccctcaccggtatcatcaagcccggcgatacctcgccg
cagattgccaacatcgtcaagggtatccagctgaagggctccgacgccctgacgacatcg
catgccgacgtgttctcgtcctatcagcagacgccgctttacacgccggaactggtctcg
ctggtcgaagcgttccagaaggaaaaaggcctgacggccgatggcgtcatcggccagtcc
accgttcgtgcgatcgtcggggaaaacagcgatgcaaagctgcagaagctgaccatcgcc
atggaacagctgcgctggctgccggaccagctcggtccgcgctacgtcttcatcaaccag
ccggccttcatggtctactactacaacgacaacaaggaagcgttgtcgatgcgcgtcgtc
gtcggcgccaaggggcaccagacgaacttcttcgagaaccagatccagaccgtcgagttc
aacccctactggggcgtgccgcagtcgatcatcgtcaacgagatgctgccgaagctcagg
gccgatccgaactatctcgacaagaccggctaccaggtcgaggtcaacggtcgcgccgtt
ccttcgtccagcgtcgactggtacggatcgaccaccaacatcgccgtgcgtcagccaccg
agcagcgacaatgcgctgggcgaactgaagatcctgttcccgaacagccatgcgatctac
atgcatgacacgccgtcgaagagcttcttcaagaaggacatgcgcgccctcagccacggc
tgtgtccgcctggccgatccgcgcgccatggcagcggcagtgctgaacacgaccgttgcc
gatgtcgccaagcagatctcaaccggcgagaacaaggccgtgccggtgccgcagcgcttc
ccggtctacatcgcctacttcacggcgtggccggacaaagatggcgtcgttcgctacttc
gacgatgtctacgatcgcgacagctataccaagaaggcgttcgctacgacgaccaaggtt
cgcgaagcgcagatctga
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