Rhizobium tumorigenes: PR017_08140
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Entry
PR017_08140 CDS
T08990
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03410
Base excision repair
rtu03430
Mismatch repair
rtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PR017_08140 (recJ)
03430 Mismatch repair
PR017_08140 (recJ)
03440 Homologous recombination
PR017_08140 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_08140 (recJ)
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PR017_08140 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PR017_08140 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PR017_08140 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
WFR97063
UniProt:
A0AAF1K6E7
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All DBs
Position
complement(1635548..1637356)
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AA seq
602 aa
AA seq
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MGPIEAADPVQRAFLGVERSAGGNRWVSRLDQAGQNRALAMAQTHGMADLIARVLAGRGV
GLDEAMAFLDPTIRGLMPDPHRLTDCEKAAERLLQAVKTGESVAVFGDYDVDGAASSALM
YKFLRHFDVPATIYIPDRIFEGYGPNPTAINQLIDNGARLIVTVDCGSTSFESLDAAKAR
NIDVVVIDHHQVGDALPHCHALVNPNREDDLSGQGHLCAAGVVFLVLVATLRLLRQSGDL
RAGNIDLLAWLDIVALATVCDVVPLKGLNRAYVVKGLLAARHQGNPGLAALFRKAGLGGP
VTPYHFGFMIGPRINAGGRIGDAALGSRLLTLEDASEADVIAEKLDELNRERQAMEAVML
KEAEAEALAEYGNGEGAAVIVTAHDNWHPGIVGLISSRLKDSFRRPAFAIAFDSQGKGTG
SGRSISGFDMGKMVRAAVDAGLLVKGGGHAMAAGLTVERANLGKLRAFFAERAEKQVFGL
VADSTLKIDGALGASGATVELVDQLETAGPFGSGHPQPIFAIPSHRLRDSRLVGQNHIKV
TLEAMDGGRLEGIAFRAAETPLGDLLLGSRGAQLHVAGTLGADHWQGARRVQLRVTDAAK
AP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgatcgaagcggcagaccccgtacagcgggcatttctgggggtggagcgttcg
gccggcggtaaccgctgggtgtcgcggctcgaccaggccggacagaaccgggcactggcg
atggcccagacccacgggatggcggacctgatcgcccgcgtgcttgccggccgcggcgtc
ggtctcgacgaggctatggcttttctcgatcctaccattcgcggcctgatgcccgatccg
caccggctgacggattgcgagaaggctgccgagcggctgctgcaggccgtcaagacaggc
gagagtgtcgctgtattcggcgactacgatgtcgacggtgcagcctcctcggcgctgatg
tacaaattcctgaggcacttcgacgtgccggcgaccatctatatccccgaccggatcttc
gaaggctacggcccgaacccgacagccatcaaccagctgatcgacaacggtgcgaggctg
atcgtcactgtcgactgcggctccaccagcttcgaatcgctggatgctgccaaggcgcgg
aacatcgacgtcgtcgtcatcgatcaccaccaggtcggcgacgcgctgccgcattgccat
gcgctggtcaatccgaaccgcgaggacgatctatcggggcagggccatctctgcgctgcc
ggcgtggtcttccttgtgctggtggcgacgttgcggctgctgcgccagtccggcgatctc
agagccggcaatatcgacctgcttgcctggctcgacatcgtagcgcttgccaccgtctgc
gacgtggtgccgctgaaggggctgaaccgcgcctatgtggtcaagggcctgctggctgcc
cgccaccaaggtaatccggggctggcggcgctgttccgcaaggcggggctcggcggcccc
gttacgccctaccatttcggcttcatgatcggcccgcgcatcaatgccggcggccgcatc
ggcgatgccgcgctcggtagccggctactgacattagaggacgcatcggaagccgacgtc
attgccgagaagctcgacgagctcaaccgcgagcggcaggcgatggaagcggtcatgctg
aaggaggccgaggcggaagcgctggccgaatacggcaacggcgagggtgctgccgtcatc
gttaccgcccatgacaactggcatccgggcatcgtcgggctgatctcgtcacggctgaag
gattcgttccgccggccggccttcgccatcgccttcgattcgcagggcaagggcaccggc
tccggccgttcgatcagcggcttcgacatgggcaagatggtgcgcgccgccgtcgatgcc
gggctgctcgtcaagggcggcggtcatgcaatggctgccggcctgacggtcgaacgtgcc
aatctcggcaagctgcgggctttctttgccgagcgggccgaaaagcaggtgttcgggctc
gtcgccgattcgacgttgaagatcgacggcgcgctgggggcgagcggcgccacggtcgaa
cttgtcgatcaactggaaactgcgggaccgtttggctccggccacccgcagccgattttc
gccatacccagccaccgcctgcgcgattcgcgactggtcggccagaaccatatcaaggtg
acgctcgaggcaatggatggcggccgcctggaaggcattgcgttccgggccgcagagacg
ccgctcggcgacctgctgctcggttcacgcggagcacagctgcacgtcgcgggaacgctg
ggtgctgaccactggcagggtgcccgccgcgtccagctaagggtcacggatgccgccaag
gcgccatga
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