Rhizobium tumorigenes: PR017_08240
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Entry
PR017_08240 CDS
T08990
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu02024
Quorum sensing
rtu03060
Protein export
rtu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PR017_08240 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PR017_08240 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PR017_08240 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rtu02044
]
PR017_08240 (secDF)
Secretion system [BR:
rtu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PR017_08240 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
SecD-TM1
Motif
Other DBs
NCBI-ProteinID:
WFR97082
UniProt:
A0AAF1KCZ2
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All DBs
Position
complement(1656516..1659065)
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AA seq
849 aa
AA seq
DB search
MLQFSRWKTILVWLAVVASVLVALPNLFSDRQLERFPSWLPHHKAILGLDLQGGSRISLK
IERDEIVAARLQSTINDVARRLRDAKIPTVDLSGTVQTITMHLTDVGQMAAATDALKPLT
DSVGSSATGGSIREATVVPGDGGLITVALTNEGIAFRTAEALDQSIEVVRSRVKQVGRRE
PLIQRQGNDRLIVEVPGLTDPQRLKTLLNQPAKLTFNMLDTSMPVQTAIDTQPPANSEVL
YSQDDPPESYLAFKRPVANDQSIIAAEPMLDTQTKQNVVTFQLDAKATQAFAQATAKNVG
KSYVAVLDDQVISAPLIKQPVTDGKGMLAGNFSPEGAADLVILLHSGSLPATLTVVEERT
VEPGLGADSARASIIAGIVGALAVVAFMVFFYGSLGGFATAALVFNIILIMAILSLFQAT
LTLPGIAGIIFTMGLAVDSNVLIYERIREKLKGGTPFVQACESGFARAYTTIIDANVTTL
IAAAILFSMGSGPVRGFAVTLGIGIIASLFTAFTLTRWLIAIWIKRRRPKHLPKGVRTAV
FDGANIRFMGIRRYTFTISAVLSVLSMIGFFSFGMHLGVDFTGGSLIEVRAKQGKVDIPD
IKTRLGQLNIGDVQAQPISNATGALIRLQSQDGGENAEQSAVTLVRGELQDKYEFRRVEV
VGPAISGQLTRAGTFGVMASLAAIFIYIWVRFAWQYALGAIIATLHDIILTFGLFVVTGI
EFNLTSIAAVLTIIGYSLNDTVVVYDRMRENLRHYKQMPLPILIDASINQTLSRTVLTAA
TTLLALLALSIFGGEVIRSFTFVMFFGVAVGTFSSIYIAAPVLIAFKLRPRGVQPGPQPD
VPPAGKAVA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattctcccgctggaagacaatcctcgtttggcttgccgtcgttgccagcgtc
ctcgtcgcacttcccaacctgttcagcgaccgccagctcgagcgtttcccgagctggctg
ccgcaccacaaggcaatcctcggtctcgacctccagggcggatcgcggatctcgctgaag
atcgagcgcgacgagatcgtcgccgcccggctgcaatcgacgatcaacgatgtcgcccgt
cggctgcgtgatgcgaaaattcccaccgtcgatctttccggtaccgtccagaccatcacc
atgcacctgaccgacgtcggccagatggcggcggcaaccgatgcactcaagcctttgacc
gacagcgtcggcagttcggccactggcggttcaatccgcgaggcgaccgtcgtccccggc
gatggcggcctgattaccgtggcactgacaaacgaaggcatcgccttccgtactgcagag
gcgctagaccagtcgatcgaagtggttcgcagccgcgtcaagcaggtcggccgccgcgag
ccgctgatccagcggcagggcaacgaccggctcatcgtcgaggtgcccggcctgaccgat
ccccagcggctgaagacgctgctgaaccagccggccaagctgactttcaacatgctggat
accagcatgccggtgcagacggcgatcgacacccagccaccggcaaattccgaagtactg
tattcacaggacgatccgccggaaagctaccttgccttcaagcggcccgttgccaacgac
cagagcatcatcgccgccgagccgatgctggatacccagaccaagcagaatgtcgtgacc
ttccagcttgacgcgaaggccacccaggcattcgcacaggcgacggcgaagaacgtcgga
aaatcctatgtcgccgtgcttgacgaccaggtgatctcggcgccgctgatcaagcagccc
gtgaccgatggcaagggcatgctggcaggcaatttttcgcccgagggggctgccgatctg
gttatcctcctgcactccggctcgttgccggcaacgctgaccgtcgtcgaggagcgcact
gtcgagcccgggctcggcgcggattccgcccgggccagcatcatcgccggcatcgtcggc
gcgctggccgtggttgccttcatggtgttcttctatggttcgcttggtggtttcgcgact
gcggcgctggtcttcaacatcattcttatcatggcgatcctcagccttttccaggcgacg
ctgaccttgcccggtatcgccggcatcatcttcacgatgggcctggcggtcgattcgaac
gtgctgatctatgagcgtatacgcgaaaagctgaaaggtgggacgccgttcgtgcaggct
tgcgaaagcggatttgcgcgcgcctacacgaccatcatcgatgccaatgttacgaccctg
attgccgctgccatcctgttctccatggggagcggtcccgtgcgcggctttgccgtgacg
ctcgggatcggcatcatcgcgtcgctgtttacggctttcacgctgacgcgctggctgatt
gctatctggatcaagcgccgccggcccaagcatttgccgaagggtgtgcggactgctgtc
ttcgacggtgccaatatccgcttcatgggcatccgccgctatactttcacgatctcggcc
gtgctttcggtgctgtcgatgattggtttcttctcgttcggcatgcatctcggtgtcgat
tttaccggcggctcgctgatcgaggttcgtgccaagcagggcaaggtcgatatcccggat
atcaagacgcggctcgggcagctgaatatcggcgatgtgcaggcgcaaccgatcagcaat
gcgaccggtgcgctgatccgtctgcagtcgcaggatggcggcgaaaatgccgagcagtcg
gcggtcacgctggtgcgtggcgaattgcaggacaagtacgagttccgccgtgtcgaggtg
gtgggtccggcaatctcgggccaactgacgagggcgggtacgttcggcgtgatggcctcc
ctggcggcgatcttcatctacatctgggtgcggtttgcctggcagtatgcgctgggcgcg
attatcgccaccctgcacgatatcatcctgaccttcggcctgttcgttgtcaccggtatc
gaattcaacctaacgagcatcgcagcggtgctgacgatcatcggctattcgctcaacgat
accgtcgtcgtctacgaccggatgcgtgaaaacctcaggcactacaagcagatgccgttg
ccgatcctcatcgatgcgtcgatcaaccagaccctgtcgcgcaccgtgctgacggcggca
accacattgctggcgctgctggcgctgtcgatcttcggcggcgaggtcatccgctcgttc
accttcgtgatgttcttcggcgttgcggtcggcaccttctcgtcgatctatatcgccgca
ccggtgctgatcgccttcaagcttcggccgcgcggtgtgcagcccggtccgcagcctgat
gtgccgccagccggcaaggcggtggcctga
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