Rhizobium tumorigenes: PR017_09070
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Entry
PR017_09070 CDS
T08990
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03420
Nucleotide excision repair
rtu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PR017_09070
03430 Mismatch repair
PR017_09070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_09070
Enzymes [BR:
rtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PR017_09070
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PR017_09070
MMR (mismatch excision repair)
Other MMR factors
PR017_09070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WFR97227
UniProt:
A0AAF1KRY1
LinkDB
All DBs
Position
1830201..1832672
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AA seq
823 aa
AA seq
DB search
MTIGQDDIPFFDEEPEHAEPRRHEPAAARPQAAGGIAARAMAARDVGRVPDYLAGLNAEQ
TEAVETLEGPLLVLAGAGTGKTRVLTTRIAHILSTNRAFPSQILSVTFTNKAAREMKERV
ALLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLTSDFSILDTDDVVRLIKQIIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIAEGDARAFANGKGRELYAAYQARLKTLNACDFGD
LLLHPITMFRQNPDVLKDYHQRFRYILVDEYQDTNTAQYMWLRLLAQRPKGEMQNVCCVG
DDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLGKT
LFTDRSDPEDAKVQVHAAWDSEEEARALGEEIEQLQRGGHALNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERMEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTVRA
LHDYARARNIPMLAAAADIIETDEMKPKPRKALYDVVMSVRRWQERLENAPHTELAEQIL
EESGYTDMWKNDKSAEAPGRLDNLKELIRSMDSFESMRGFLEHVSLVMDAENNENLDAVS
IMTLHSAKGLEFKTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGLTRAKRLCHIW
FVSNRRIHGLWQSTLPSRFLDELPNTHVSVAETEQSYGGYGRSAYGQSRFDKAEPFSNSY
GTPGWKRAQANKTDATRDNWGSRSGHAVERIGYGESGPKARTIDGELVAKSTTDTPSRFA
VGERIFHIKFGNGNISAIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacgataggacaagacgacattcccttcttcgacgaagagcccgagcacgccgagcca
aggcgccacgagccggctgcagcgcgtccgcaggctgccggcggcatcgcggcgcgcgcc
atggctgcgcgcgatgtcggccgcgtgccggattacctcgccggcctcaacgccgagcag
acagaggctgtcgagacgctggaggggccgctgctggtactggccggcgccggcaccggc
aagacccgcgtgctcaccacccgtatcgcccatatcctgtcgaccaaccgcgccttcccc
agccagatcctgtcggtgacattcaccaacaaggcggcgcgcgagatgaaggagcgtgtt
gcgctgctggtcggcggcgcagtcgaaggcatgccatggctcggcaccttccactcaatc
ggcgtcaagctgctccgccgtcacgcggaactggtcggcctgacatcggatttctccatc
ctcgataccgacgacgtcgttcgcctgatcaagcagatcatccaggccgagggcctggac
gacaagcgctggccggcgaagcaattcgccggcatgatcgatggctggaagaacaaggga
ctgacaccgcccgatatcgccgagggcgatgcccgtgcttttgccaatggcaagggccgc
gaactctatgctgcctaccaggcgcggctgaagacgctgaacgcctgcgatttcggcgac
ctgctgctgcatccgatcaccatgttccgccagaacccggatgtcctgaaggattatcac
cagcgcttccgctatatcctcgtcgacgagtatcaggacaccaacaccgcgcagtacatg
tggctgcggctcttggcccagcggccgaagggcgagatgcagaatgtctgctgcgtcggc
gacgacgaccagtcgatctatggctggcgcggcgccgaggtcgacaacatcctgcgcttc
gagaaggatttcccgggcgccaaggtgatcaagctcgagcgcaactaccgctcgaccgag
cacatcctcggcgccgctgcccatctgatcgcccacaacgaaggccggctcggcaagacg
cttttcaccgaccgcagcgatcccgaggacgccaaggttcaggttcacgccgcctgggac
tcggaagaggaagcccgggcgttgggcgaagagatcgagcagctgcagcgcggcggccac
gcgctgaatgacatggcgatcctcgtgcgcgcctcgttccagatgcgcgagttcgaagac
cgcttcgtcacgctcggcctcaactaccgcgtcatcggcggtccacgcttttacgagcgc
atggaaatccgcgatgccatggcctatttccgcctggtctgccagccggccgatgacctc
gccttcgagcgcatcgtcaacacaccgaaacgcggtcttggcgacaccacggtgcgcgcc
ctgcacgactatgcccgcgcccgcaatatacccatgctggccgcggcagccgacattatc
gagactgacgagatgaagccgaagccgcgcaaggctttgtacgacgtcgtgatgtccgtc
cgccgctggcaggaacggctcgaaaacgcaccccacacggagcttgccgagcagatcctc
gaggaatccggctacaccgacatgtggaagaacgacaagtcggctgaagcgccgggccgc
ctcgacaacctgaaagaactgatccgctcgatggacagtttcgagagcatgcgcggcttc
ctcgaacatgtctcgctggtcatggatgccgaaaacaacgagaacctcgatgctgtctcg
atcatgacgctgcattccgccaaggggctggaattcaagacggtcttcctgcccggctgg
gaggaaggcctgtttccccaccagcgctcgctcgacgagagcggacgggcgggtctcgag
gaggaacgccggcttgcctatgtcgggctgacgcgggcaaaacgcctctgccacatctgg
ttcgtctcgaaccgccgcatacacggcctctggcaatccaccctgccctcccgcttcctc
gacgaattgccaaatacgcacgtgtccgtcgccgagaccgagcaatcctatggcggctat
gggcgcagcgcctacggtcagtcacgcttcgacaaggccgagcccttttccaacagctac
ggcacgccgggctggaaacgcgcccaggccaacaagaccgatgcaacgcgcgacaactgg
ggctcgcgctccggccacgcggtcgagcgcatcggctacggcgaaagcggcccgaaggcg
cgcaccatcgacggcgaactggtggcaaagtcgaccaccgacacgccctcgcgcttcgcg
gtcggagagcgcatctttcacatcaagttcggcaacggcaacatctccgccatcgaaggc
aacaagctgaccatcgaattcgacagggccgggcagaagcgggttttggatgggtttgtg
gagagggtgtga
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