Rhizobium tumorigenes: PR017_09160
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Entry
PR017_09160 CDS
T08990
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu03030
DNA replication
rtu03430
Mismatch repair
rtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PR017_09160
03430 Mismatch repair
PR017_09160
03440 Homologous recombination
PR017_09160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtu03032
]
PR017_09160
03400 DNA repair and recombination proteins [BR:
rtu03400
]
PR017_09160
Enzymes [BR:
rtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PR017_09160
DNA replication proteins [BR:
rtu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PR017_09160
DNA repair and recombination proteins [BR:
rtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PR017_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WFR94019
UniProt:
A0AAF1K1V6
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All DBs
Position
complement(1847570..1848160)
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AA seq
196 aa
AA seq
DB search
MKTIAIDFETANEQRGSACSVGLAWIEDGRVVRVEERLIRPKEMRFSGFNIAIHGIRPEH
VEGAPSFPEVMEEFHEDFRGATMIAHNASFDFSVWRASLDHYRQSYPELFYLCSLKMAQR
IWPQLLSHRLNVIAEHLALRFKHHNAAEDAAICASAAIEMAKAVKAVDVGGIPAAIGMTI
GRLTSRGYEPCTCRKR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactattgccatcgattttgagactgccaacgaacagcgcggcagcgcctgttcg
gtcggactggcgtggattgaggacgggcgtgtggtgcgggtggaggagcggctgatcagg
ccgaaggaaatgcggttttcgggtttcaacatcgccattcacggcatccggccggagcat
gtcgagggtgcaccttcgtttcccgaggtgatggaggagttccacgaggattttcgcggc
gccacgatgatcgcccacaatgcgtccttcgatttcagcgtctggcgggcgagcctcgat
cactaccggcagtcctatccggagttgttctacctctgcagcctgaaaatggcgcagcgt
atctggccgcagcttctgtcgcaccggttgaatgtgatcgccgagcatctggcgctgagg
ttcaagcatcacaatgccgctgaagacgcagccatctgtgcctcggccgctatcgagatg
gccaaggcggtaaaggcggtcgatgtcggcggcattccagccgcaatcggcatgacgatc
ggtcgcctgacatcacgcggctacgagccctgtacctgccgcaagcgctga
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