Rhizobium tumorigenes: PR017_09865
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Entry
PR017_09865 CDS
T08990
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00240
Pyrimidine metabolism
rtu00250
Alanine, aspartate and glutamate metabolism
rtu01100
Metabolic pathways
rtu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PR017_09865 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PR017_09865 (carB)
Enzymes [BR:
rtu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PR017_09865 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
CoA_binding_2
RimK
Motif
Other DBs
NCBI-ProteinID:
WFR94155
LinkDB
All DBs
Position
1996619..2000104
Genome browser
AA seq
1161 aa
AA seq
DB search
MPKREDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPDL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP
AAIDMAEDRALFREAMARIGLETPKSLLANATDAKELDRQTHEAEREKVKASLSGAELDI
ALDDLENTWNLGETDRKQRYMSHAMALAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE
FFEIVGSGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPADGRLVVIEMNPRVSRS
SALASKATGFPIARVAAKLAVGYTLDELDNDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGASPVLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEIPGTEEGEGSRNAI
RAAIGTPTPDRLRMVAQALRMGMSAEEVHEGCKIDPWFIAQLKAIVDMEARIREHGLPDD
AVNLRMLKAMGFSDARLATLTNKRPKEVAERRNALNVRPVFKRIDTCAAEFASPTAYMYS
SYETPFVGEARSEANVSSNKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGYEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEILRAEQESGEVVGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDMIDLAEDRDRFQKLLMKLDLNQPNNGIAYSVEQARVVASEIGFPLVVRP
SYVLGGRAMQIIHSESMLQSYLLDTVPGLVPEDIKQRYPNDKTGQINTLLSKNPLLFDSY
LSNAIEIDVDCLADGENAFIAGIMEHIEEAGIHSGDSACSLPPRTLSSEMLDELERQTKA
MAKALNVVGLMNVQFAIKDDVVYVLEVNPRASRTVPFVAKAIGAPIAKIAARIMAGESLD
AAFAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDTLLGPEMRSTGEVIGLDTDFALAFAK
AQLGAGVELPRGGTVFVAVRDDDKPRVLPAIRMLVEQGFKVMATGGTARYLAEHGIATTK
INKVLEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSIRRATLMQKVPYYTTMAGAEAA
AMAIQALKAGNLEVRPLQSYF
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgaagatattaaatcgatcctcatcatcggtgcggggccgatcgttatc
ggtcaggcatgcgaattcgactattccggcacccaggcctgcaaggcgctgaaagaggaa
ggctaccgtgtcatcctcgtcaattccaatccggcaacgatcatgaccgacccggatctg
gccgacgccacttacgtcgagccgatcacgcctgaagtcgtcgccaagattatcgccaag
gagcgccccgacgcgctgcttccaaccatgggcggccagaccgcgctcaacaccgcgctc
tccctgaagagaatgggcgtgctcgatcgctacaatgtcgagatgatcggcgccaagccg
gccgccatcgacatggccgaagaccgcgccctcttccgcgaagctatggcccgtatcggc
cttgaaacaccgaagtcgctgctggcaaacgcgaccgacgccaaggaactcgaccgccag
acccacgaggccgagcgcgaaaaggtcaaggccagcctgtccggtgccgaactcgacatc
gccctcgacgatctggaaaacacctggaacctcggcgagaccgaccgcaagcagcgctac
atgagccatgccatggcgctggcagcccaggcgatcgacgttgtcggcctgcccgccatc
atccgtccatccttcaccatgggcggcacaggcggcggcatcgcctacaatcgctctgag
ttcttcgagatcgtcggctccggcttagacgcctcgccgaccacggaagtgctgatcgag
gaatcggtgctcggctggaaggagtatgaaatggaagtcgtccgcgacaaggcggacaac
tgcatcatcatctgctccatcgagaacatcgacccgatgggcgtccacaccggcgatagc
atcaccgtcgcgcctgccctgacgctgaccgacaaagaataccagatgatgcgcaacgcc
tcgatcgccgttctgcgcgagatcggcgtagagaccggcggctcgaacgtgcagttcgcc
gtcaacccggccgatggccgcctcgtcgtcatcgagatgaacccacgcgtctcgcgctcc
tcggcgctggcctccaaggcaacgggcttcccgattgcccgcgttgccgccaagcttgcg
gtcggctacacgctcgacgaactcgacaacgacatcactggcggcgcgacgcctgcttcg
ttcgaaccgtcgatcgactatgtcgtcaccaagatcccgcgcttcgccttcgagaagttc
cccggcgcctcgcctgtgctgacaacggcaatgaagtcggtcggggaagtcatggccatc
ggccggacctttgccgaatcgctgcagaaggcgctgcgtggcctggaaaccggactcacc
ggtctcgacgagatcgagatccccggcaccgaagagggcgaaggcagccgcaatgccatc
cgcgcagccatcggcaccccgacgccggaccgcctgcgcatggtcgcccaagcactgcgc
atgggcatgagcgccgaagaggtgcacgaaggctgcaagatcgacccctggttcatcgcc
cagctgaaggccatcgtcgatatggaagcccgcatccgcgagcacggccttccggacgat
gccgtcaacctgcgcatgctcaaggcgatgggcttttccgacgcgcgcctggcgaccctc
accaacaagcgtccgaaggaagttgccgagaggcgaaacgccctcaacgtccgtccggtg
ttcaagcgcatcgacacctgcgccgccgagttcgcctcgccgaccgcctacatgtattcg
agctacgagacgcctttcgtgggagaagcgcgctccgaggccaatgtctcgtcgaacaag
aaggtcgtaatcctcggcggcggtccgaaccgcatcggccagggcattgagttcgactat
tgctgctgccacgccgccttcgcgctgaaggatgccggctatgaagccatcatgatcaac
tgcaacccggaaacagtgtcgaccgactacgacacgtctgaccggctctatttcgagcca
ctgaccgccgaagacgtgatcgagatcctgcgcgccgagcaggaaagcggcgaagtcgtc
ggcgtcatcgtgcagttcggcggccagacgccgctgaagctcgccgaagctctggaaaag
aacggcattccgatcctcggcacggcacccgacatgatcgaccttgccgaagaccgcgac
cgcttccagaagctgctgatgaagctcgacctcaaccagccgaacaacggcatcgcctac
tcggtcgaacaggcgcgcgtcgtcgcctccgaaatcggcttcccgctggtggtccgccct
tcctatgtcctcggcggccgcgccatgcagatcatccactcggaatcgatgctgcaaagc
taccttctcgatacggtgcccggcctggtgccggaagacatcaagcagcgttatccgaac
gacaagaccggccagatcaacaccttgctcagcaagaacccgctgctgttcgacagctac
ctgtcgaacgccatcgagatcgacgtcgattgcctggccgatggcgagaacgccttcatc
gcgggtatcatggagcatatcgaggaagccggcatccactccggcgacagcgcctgctcg
ttgccgccacgcacgctttcgtccgaaatgcttgacgaactcgagcgccagacgaaggcc
atggccaaggcgctgaatgttgtcggcctgatgaacgtacagtttgccatcaaggacgat
gtcgtctacgtccttgaggtcaacccccgcgcctcgcgcacagtgcctttcgttgccaag
gcgattggcgcgccgattgccaagatcgcggcccgcatcatggccggcgaaagtctcgat
gccgccttcgccgcctatggcgagaagcccgatccgcgcaatctcaagcacattgccgtc
aaggaagccgtgttcccgttcgcccgcttccccggcgtcgacacgctgctcggccctgaa
atgcgctcgaccggcgaggtcatcggcctcgacaccgatttcgcattggcctttgccaag
gcgcagctcggcgccggcgtcgagttgccacgcggcggcaccgtcttcgtggcggtacgc
gacgacgacaagccacgcgtcctgcccgccatcaggatgcttgtcgaacaggggttcaag
gtgatggcaacaggcggcacggcccgctatctcgccgaacacggcatcgccaccaccaag
atcaacaaggtgctggaaggccgtccgcatatcgaggacgccatccgcaaccgccaagtc
cagctcgtcatcaacacaacggacagcaacaaggcgatctcggactccaaatcgatccgc
cgcgccacgctgatgcagaaggtgccctactacacgaccatggccggcgccgaggccgcc
gccatggccatccaggccctgaaagccggcaatctcgaagttcgtccgctgcagagctac
ttctga
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