Rhizobium tumorigenes: PR017_11980
Help
Entry
PR017_11980 CDS
T08990
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
rtu
Rhizobium tumorigenes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_7
AAA
Mg_chelatase
AAA_2
MCM
HTH_22
HTH_23
AAA_19
RWP-RK
Phage_AlpA
HTH_29
AAA_16
HTH_28
HTH_Tnp_1_2
VpsR
AAA_7
TetR_N
Motif
Other DBs
NCBI-ProteinID:
WFR94544
UniProt:
A0AAF1K2Q7
LinkDB
All DBs
Position
2442380..2443960
Genome browser
AA seq
526 aa
AA seq
DB search
MTIHNDAKVGAQILIVEDDPVQRRLLKNAVERHGYATLLAENGRLGLQVLKENSGRVNVI
VLDLMMPEMGGLEFLAALHEMGTDIPVIVQTGQGGIETVVQAMRAGAFDFVVKPVSPERI
ASAIHGALKLDQREAKARAGRKTRSGSIGFDDIISASPAMIRITDLAQRAALSNIPVVLE
GESGVGKELVARAIQSASDRANKPFITVNCGAIPHNLVESILFGHEKGAFTGATERHVGK
FMEADGGTLFLDEVGDLPVEVQVKLLRAVQQGEIETIGARTTQKVNVRLISATNKDLIEE
VKAGRFREDLYYRLNVFPITMPALRRRKEDIPHLVRVFVERFSAEQKIGHTLGISAGAMA
LLTAYDWPGNIRQLENAIFRAVVLAQGSDLVEADFPQIAAQLPGYLTSEQMAAGGISRRA
MGEGGLSLVGGRESDHVESVTNESPAPQPAEKTDVSVPDNQIASTGPSGEVRKLADIEEE
LIRFALKFYRGQMSQVARKLGIGRSTLYRKLKDYGIDPDDPQKNAA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaccatacataatgacgccaaggtcggcgcgcagattctcatcgtcgaggatgatccg
gtccagcgccggcttctgaagaacgctgtcgagcggcatggctatgcgacgttgctggcc
gagaacggtcggctcgggctacaggtcctcaaagagaacagcggccgcgtcaatgtcatc
gtgctcgatctgatgatgccggaaatgggcgggctggaatttctggccgcccttcacgag
atgggcaccgacataccggtgatcgtccagacaggccagggcggcatcgaaaccgtggtg
caggcgatgcgcgccggcgctttcgatttcgtcgtcaagccggtttcgcccgaacgcatc
gcaagcgccattcacggcgccctgaagctcgaccagcgcgaagccaaagcgcgggccggc
cgcaagacgcgctccggcagcatcggcttcgacgacatcatctccgccagtccggcgatg
atccgcatcaccgacctcgcccagcgggcagcgctttcgaacatccccgtggtgctcgag
ggcgaatccggcgtcggcaaggaattggtggcacgcgccatacagtcggccagcgaccgc
gccaacaagcctttcatcaccgtcaactgtggcgccatcccccacaacctcgtcgaaagc
atcctctttggccacgaaaagggtgcgttcaccggcgccacagagcgccatgtcggcaag
ttcatggaagccgatggcggcacgctgttcctcgacgaagttggcgacctgcctgtcgag
gtgcaggtgaagctgctgcgcgccgtacagcagggcgaaatcgaaacgatcggcgcccgc
acgacgcaaaaagtcaatgtcaggctgatctccgccacaaacaaggacctgatcgaggaa
gtgaaggccgggcggttccgcgaggatctctattaccgcctcaacgtcttcccgatcacc
atgccggcgctgcgccggcgcaaggaagatatcccgcatctggtacgcgtcttcgtcgag
cgcttttccgccgagcagaagatcggtcacacgctcggcatcagcgccggcgccatggcg
ctgctgacagcctacgactggcccggcaatatccgccagctcgaaaacgccatcttccgc
gccgtcgtcctggcgcagggctccgatctggtcgaagcggattttccgcagatcgccgct
caactgccgggctacctcacctcggaacagatggctgccggcggcatctccaggcgtgcc
atgggcgaaggcggtctttcgctcgtgggcgggcgagaatcggaccacgtcgagagcgtc
accaacgaatcaccggcgccccaaccggctgaaaaaaccgatgtttcggttcccgacaat
cagatcgccagcaccggtccgtccggagaagtgcggaaactggccgacatagaggaggaa
ttgattcgttttgcactgaaattttaccgcggccagatgagccaggtagcccgaaaacta
ggcattggccgctctaccctctaccgcaaattgaaggattacggtatagatccggatgac
ccacagaaaaacgctgcctga
DBGET
integrated database retrieval system
