Rhizobium tumorigenes: PR017_12385
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Entry
PR017_12385 CDS
T08990
Symbol
odc2
Name
(GenBank) ornithine/lysine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00330
Arginine and proline metabolism
rtu00480
Glutathione metabolism
rtu01100
Metabolic pathways
rtu01110
Biosynthesis of secondary metabolites
rtu04148
Efferocytosis
Module
rtu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PR017_12385 (odc2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PR017_12385 (odc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PR017_12385 (odc2)
Enzymes [BR:
rtu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PR017_12385 (odc2)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WFR94620
UniProt:
A0AAF1KDW8
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Position
complement(2538819..2539952)
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AA seq
377 aa
AA seq
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MTTQRIRDFLATRRPDGPCLVLDLDVVRDNFHAFRHAMPDSSIYYAVKANPAPEVLKLLA
GMGSNFDCASVAEVEMALDAGATAARISFGNTIKKERDIARAHALGVSLFAVDSHEEVEK
MARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLESYGVSFHVGSQ
MTKVDAWDSALADAKRVFVSLGKQGIHLQMVNMGGGFPTKYLRDVPAAEAYGKAINQSLR
DHFGNQIPKTIIEPGRGMVGNAGVIKAEVVLISKKSDNDEARWVFLDIGKFGGLAETMDE
AIRYPIRTERDGDEMEPCIIAGPTCDSADVLYEKNLYPLPLSLTIGDEVFIEGTGAYTTT
YSAVAFNGFDPLKSYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcagcgcatccgcgactttcttgcaacccgacgtcccgacggcccttgcctc
gtgctggatctcgacgtggtccgcgacaattttcacgctttccgtcacgccatgccggac
agctctatctattatgccgtcaaggccaatccggctcctgaagtgttgaagcttctggcc
ggcatgggctccaacttcgattgcgcgtccgtcgctgaagtcgaaatggcgctcgacgct
ggtgcaacggctgctcgcatctctttcggcaacacgatcaagaaggaacgggacatcgcc
cgtgcgcatgcactcggtgtcagccttttcgccgtggacagccatgaagaagtcgagaag
atggcccgtgccgctcctggtgcccgcgtattctgccgtgtcctgacggatggcgagggt
gccgaatggccgctgtcgcgcaagttcggctgcgttccgcagatggctgtcgacgtcctc
gtttatgcacatcagctgggccttgaatcctatggcgtgtcgttccacgtcggctcgcag
atgaccaaggtcgatgcctgggactcggctcttgccgatgccaagcgcgtgttcgtttcg
ctgggcaagcagggcatccacctgcagatggtcaacatgggcggtggatttccgaccaag
tacctgcgcgacgttcctgctgccgaagcctatggcaaggccatcaaccagagcctgcgc
gatcacttcggcaaccagatcccgaagacgatcatcgagccaggtcgcggcatggtcggc
aacgccggcgttatcaaggcggaagtcgtgctgatctcgaagaagtcggacaatgacgaa
gcccgctgggttttcctcgatatcggcaagttcggcggtctcgccgagacgatggatgaa
gccattcgctacccgatccgcaccgagcgcgacggcgacgaaatggagccttgcatcatt
gccggcccgacctgcgattcggccgacgtgctctacgagaagaacctctatccgctgcca
ttgtcactgacgatcggcgacgaggtgttcatcgaaggcaccggcgcctatacgacgacc
tattcggctgtggcattcaacggtttcgacccgctgaagtcctacgtcatctag
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